Vibrio cholerae O1 biovar El Tor str. N16961
Accession: NC_002505
Accession: NC_002506
Experimental investigation has been performed.
Bioinformatics investigation has been performed| T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
|---|---|---|---|---|---|
| T6SS00002 | i1 | Vibrio cholerae O1 biovar El Tor str. N16961 | chromosome II (Vas) (NC_002506) | 110871..145577 | - |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
|---|---|---|---|---|---|---|---|---|---|
| REG0039 |
VC_RS13930 (VasH) | T6SS00002 |
protein | Global regulator | Vibrio cholerae O1 biovar El Tor str. N16961 | chromosome (NC_002506) | 128790..130382 (+) | 446006938 | VCA0017 (hcp-2) transcript (↓) |
| REG0288 |
VCA0566 (VxrB) | T6SS00002 |
protein | TCS-RR | Vibrio cholerae O1 biovar El Tor str. N16961 | chromosome (NC_002506) | 504728..505384 (+) | 446737785 | Unknown (↑) |
| REG0289 |
VCA0933 (CspV) | T6SS00002 |
protein | c-di-GMP regulatory pathway | Vibrio cholerae O1 biovar El Tor str. N16961 | chromosome (NC_002506) | 886068..886280 (+) | 446027150 | Unknown (↓) |
| REG0320 |
VC_A0122 | T6SS00002 |
protein | Transcription regulator | Vibrio cholerae O1 biovar El Tor str. N16961 | chromosome (NC_002506) | 137379..137621 (+) | 9657509 | hcp-2 expression (↓) |
Experimental investigation has been performed. Bioinformatics investigation has been performed Experimental investigation has been performed. Bioinformatics investigation has been performed| Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
|---|---|---|---|---|---|---|---|
| IMU00156 |
VC1419 (TsiV1) | T6SS00002 |
Vibrio cholerae O1 biovar El Tor str. N16961 | chromosome (NC_002505) | 1516533..1517276 (+) | 15641430 | EFF00006 |
| IMU00166 |
VCA0021 (TsiV2) | T6SS00002 |
Vibrio cholerae O1 biovar El Tor str. N16961 | chromosome (NC_002506) | 26653..27381 (+) | 15600792 | EFF00004 |
| IMU00172 |
VCA0124 (TsiV3) | T6SS00002 |
Vibrio cholerae O1 biovar El Tor str. N16961 | chromosome (NC_002506) | 140631..140999 (+) | 15600895 | EFF00004 |
| IMU00291 |
VC_RS14695 | T6SS00002 |
Vibrio cholerae O1 biovar El Tor str. N16961 | chromosome (NC_002506) | 305996..306223 (+) | 15601052 | EFF00004 |
Experimental investigation has been performed. Bioinformatics investigation has been performed| ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
|---|
Experimental investigation has been performed. Bioinformatics investigation has been performed| Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
|---|---|---|---|---|---|---|---|---|---|
| ACP00001 |
VC1417 | T6SS00002 |
adaptor | Vibrio cholerae O1 biovar El Tor str. N16961 | chromosome (NC_002505) | 1513748..1514608 (+) | 15641428 | VgrG-1 | VC1418 (TseL) |