SecReT4
T4SS ID161
StrainCoxiella burnetii RSA 331
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010117
Location1646724..1684114
NameDot/Icm
Functioneffector translocation
ClassificationType IVB; Type I
insolico This T4SS is identified in this study.

T4SS components
ComponentDotADotBDotCDotDIcmBIcmCIcmDIcmEIcmF
Number111111110
ComponentIcmGIcmHIcmJIcmKIcmLIcmMIcmNIcmOIcmP
Number101120111
ComponentIcmQIcmRIcmSIcmTIcmVIcmWIcmXLvgA
Number10111100

The information of T4SS components from NC_010117
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1COXBURSA331_A17981642480..1642635 [-], 156161830092hypothetical protein 
2COXBURSA331_A17991643184..1643339 [-], 156161830233hypothetical protein 
3COXBURSA331_A18021643908..1644510 [-], 603161831400hypothetical protein 
4COXBURSA331_A18031644682..1645125 [-], 444161829855hypothetical protein 
5COXBURSA331_A18041645828..1646127 [+], 300161830549hypothetical protein 
6COXBURSA331_A18051646572..1646709 [+], 138161831083hypothetical protein 
7COXBURSA331_A1806 (icmB)1646724..1649735 [-], 3012161830763IcmB protein  IcmB
8COXBURSA331_A1807 (icmJ)1649808..1650443 [-], 636161831194IcmJ protein  IcmJ
9COXBURSA331_A1808 (icmD)1650459..1650875 [-], 417161830217IcmD protein  IcmD
10COXBURSA331_A1809 (icmC)1650970..1651479 [-], 510161830267IcmC protein  IcmC
11COXBURSA331_A1810 (icmG)1651550..1652284 [-], 735161831549IcmG protein  IcmG
12COXBURSA331_A1811 (icmE)1652302..1655406 [-], 3105161829987IcmE protein  IcmE
13COXBURSA331_A1812 (icmK)1655408..1656445 [-], 1038161830902IcmK protein  IcmK
14COXBURSA331_A1813 (icmL1)1656474..1657130 [-], 657161831326IcmL protein  IcmL
15COXBURSA331_A1814 (icmL2)1657132..1657755 [-], 624161829813IcmL protein  IcmL
16COXBURSA331_A18151657762..1658274 [-], 513161830197ompA family protein  IcmN
17COXBURSA331_A1816 (icmO)1658410..1660788 [-], 2379161831537IcmO protein  IcmO
18COXBURSA331_A1817 (icmP)1660764..1661927 [-], 1164161829879IcmP protein  IcmP
19COXBURSA331_A1818 (icmQ)1661928..1662644 [-], 717161830945IcmQ protein  IcmQ
20COXBURSA331_A18191662641..1662790 [-], 150161831192hypothetical protein 
21COXBURSA331_A18201662960..1663079 [+], 120161831490hypothetical protein 
22COXBURSA331_A18211663418..1664317 [-], 900161830891hypothetical protein 
23COXBURSA331_A18221664444..1664581 [+], 138161831308hypothetical protein 
24COXBURSA331_A18231664678..1665883 [-], 1206161829850hypothetical protein 
25COXBURSA331_A18241665995..1667191 [-], 1197161831477hypothetical protein 
26COXBURSA331_A18251667266..1667412 [-], 147161830123hypothetical protein 
27COXBURSA331_A18271667419..1667691 [+], 273161830536hypothetical protein 
28COXBURSA331_A18261667688..1668707 [-], 1020161829988transposase for insertion sequence element IS1111A 
29COXBURSA331_A18281668706..1668888 [+], 183161830566hypothetical protein 
30COXBURSA331_A1829 (icmT)1668899..1669156 [+], 258161830824IcmT protein  IcmT
31COXBURSA331_A1830 (icmS)1669156..1669494 [+], 339161831360IcmS protein  IcmS
32COXBURSA331_A1831 (dotD)1669651..1670160 [+], 510161831227DotD protein  DotD
33COXBURSA331_A1832 (dotC)1670163..1670987 [+], 825161831630DotC protein  DotC
34COXBURSA331_A1833 (dotB)1671025..1672143 [+], 1119161830407Dot/Icm secretion system ATPase DotB  DotB
35COXBURSA331_A18341672150..1673529 [+], 1380161829782putative transporter 
36COXBURSA331_A18361673649..1673921 [+], 273161831347hypothetical protein 
37COXBURSA331_A18351673918..1674937 [-], 1020161830843transposase for insertion sequence element IS1111A 
38COXBURSA331_A1838 (hldE)1675232..1676659 [+], 1428161830451bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 
39COXBURSA331_A18401677047..1677319 [+], 273161829819hypothetical protein 
40COXBURSA331_A18391677316..1678335 [-], 1020161831109transposase for insertion sequence element IS1111A 
41COXBURSA331_A18411678766..1678858 [-], 93161831145hypothetical protein 
42COXBURSA331_A18421678940..1680070 [-], 1131161830259hypothetical protein 
43COXBURSA331_A18431680086..1680544 [-], 459161830926hypothetical protein 
44COXBURSA331_A1844 (icmW)1680541..1680990 [-], 450161830416IcmW protein  IcmW
45COXBURSA331_A1845 (icmV)1681219..1681677 [+], 459161830275IcmV protein  IcmV
46COXBURSA331_A1846 (dotA)1681694..1684114 [+], 2421161831559DotA protein  DotA
47COXBURSA331_A18481684523..1685542 [+], 1020161831468transposase for insertion sequence element IS1111A 
48COXBURSA331_A18471685539..1685811 [-], 273161831138hypothetical protein 
49COXBURSA331_A18491685935..1686699 [-], 765161830035glycosyl transferase family protein 
50COXBURSA331_A18501686740..1687825 [-], 1086161829909hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes

Effectors
COXBURSA331_A0124, AnkF, COXBURSA331_A1465, COXBURSA331_A1538, COXBURSA331_A1595, COXBURSA331_A0522, COXBURSA331_A0495, COXBURSA331_A2209, COXBURSA331_A1389, AnkA, COXBURSA331_A1256, COXBURSA331_A0854, COXBURSA331_A1715, COXBURSA331_A1740, COXBURSA331_A1983, COXBURSA331_A1707, AnkI, COXBURSA331_A2207, COXBURSA331_A1007, COXBURSA331_A0733, COXBURSA331_A1826, COXBURSA331_A1033, COXBURSA331_A0668, COXBURSA331_A0894, COXBURSA331_A0555, COXBURSA331_A0165, COXBURSA331_A1148, COXBURSA331_A1231, AnkG, COXBURSA331_A1537, COXBURSA331_A0330, COXBURSA331_A2024, COXBURSA331_A1529, COXBURSA331_A1652, COXBURSA331_A1296, COXBURSA331_A1676, COXBURSA331_A1419, COXBURSA331_A1155, COXBURSA331_A0714, COXBURSA331_A0120, COXBURSA331_A1585, COXBURSA331_A0893, COXBURSA331_A0265, COXBURSA331_A1338, COXBURSA331_A0612, AnkM, COXBURSA331_A0369, COXBURSA331_A1727, COXBURSA331_A0031, COXBURSA331_A1778, COXBURSA331_A0218, COXBURSA331_A1835, COXBURSA331_A1358, COXBURSA331_A2189, COXBURSA331_A1821, COXBURSA331_A0155, COXBURSA331_A0636, COXBURSA331_A2103, COXBURSA331_A1066, COXBURSA331_A1839, COXBURSA331_A1726, COXBURSA331_A1406, COXBURSA331_A0532, AnkB, COXBURSA331_A0007, COXBURSA331_A0399, COXBURSA331_A1962, COXBURSA331_A0518, COXBURSA331_A1591, COXBURSA331_A1361, COXBURSA331_A1568, COXBURSA331_A1963, COXBURSA331_A1743, COXBURSA331_A1848, COXBURSA331_A0847, COXBURSA331_A1976, COXBURSA331_A2197, COXBURSA331_A2023, COXBURSA331_A1952, COXBURSA331_A1944

The information of protein effectors
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProduct  *
1COXBURSA331_A0124 107779..108798 [+], 1020161829750transposase for insertion sequence element IS1111A  COXBURSA331_A0124
2COXBURSA331_A0556 471168..471722 [-], 555161829778ankyrin repeat-containing protein  AnkF
3COXBURSA331_A1465 1340137..1340757 [-], 621161829779hypothetical protein  COXBURSA331_A1465
4COXBURSA331_A1538 1407903..1408622 [+], 720161829781hypothetical protein  COXBURSA331_A1538
5COXBURSA331_A1595 1459674..1460693 [+], 1020161829797transposase for insertion sequence element IS1111A  COXBURSA331_A1595
6COXBURSA331_A0522 445731..446519 [+], 789161829810hypothetical protein  COXBURSA331_A0522
7COXBURSA331_A0495 421192..422211 [+], 1020161829816transposase for insertion sequence element IS1111A  COXBURSA331_A0495
8COXBURSA331_A2209 2005691..2006710 [+], 1020161829822transposase for insertion sequence element IS1111A  COXBURSA331_A2209
9COXBURSA331_A1389 1272715..1273734 [+], 1020161829824transposase for insertion sequence element IS1111A  COXBURSA331_A1389
10COXBURSA331_A0160 138075..139274 [+], 1200161829835ankyrin repeat-containing protein  AnkA
11COXBURSA331_A1256 1137397..1138416 [-], 1020161829837transposase for insertion sequence element IS1111A  COXBURSA331_A1256
12COXBURSA331_A0854 762182..763201 [+], 1020161829875transposase for insertion sequence element IS1111A  COXBURSA331_A0854
13COXBURSA331_A1715 1565943..1566962 [+], 1020161829882transposase for insertion sequence element IS1111A  COXBURSA331_A1715
14COXBURSA331_A1740 1589887..1590906 [+], 1020161829888transposase for insertion sequence element IS1111A  COXBURSA331_A1740
15COXBURSA331_A1983 1808208..1809227 [+], 1020161829904transposase for insertion sequence element IS1111A  COXBURSA331_A1983
16COXBURSA331_A1707 1558380..1560056 [-], 1677161829911hypothetical protein  COXBURSA331_A1707
17COXBURSA331_A1364 1241663..1242256 [-], 594161829938putative lipoprotein  AnkI
18COXBURSA331_A2207 2004560..2005606 [+], 1047161829950hypothetical protein  COXBURSA331_A2207
19COXBURSA331_A1007 892837..894234 [-], 1398161829980hypothetical protein  COXBURSA331_A1007
20COXBURSA331_A0733 645571..646590 [-], 1020161829982transposase for insertion sequence element IS1111A  COXBURSA331_A0733
21COXBURSA331_A1826 1667688..1668707 [-], 1020161829988transposase for insertion sequence element IS1111A  COXBURSA331_A1826
22COXBURSA331_A1033 918970..919989 [-], 1020161829990transposase for insertion sequence element IS1111A  COXBURSA331_A1033
23COXBURSA331_A0668 580933..581952 [+], 1020161830025transposase for insertion sequence element IS1111A  COXBURSA331_A0668
24COXBURSA331_A0894 796014..796994 [-], 981161830045hypothetical protein  COXBURSA331_A0894
25COXBURSA331_A0555 469790..470809 [+], 1020161830078transposase for insertion sequence element IS1111A  COXBURSA331_A0555
26COXBURSA331_A0165 144037..144828 [+], 792161830168hypothetical protein  COXBURSA331_A0165
27COXBURSA331_A1148 (rimI)1031574..1032011 [-], 438161830175ribosomal-protein-alanine acetyltransferase  COXBURSA331_A1148
28COXBURSA331_A1231 1113245..1114264 [+], 1020161830198transposase for insertion sequence element IS1111A  COXBURSA331_A1231
29COXBURSA331_A1167 1056832..1057512 [-], 681161830207ankyrin repeat-containing protein  AnkG
30COXBURSA331_A1537 1406608..1407678 [-], 1071161830234protein kinase domain-containing protein  COXBURSA331_A1537
31COXBURSA331_A0330 294323..295342 [-], 1020161830278transposase for insertion sequence element IS1111A  COXBURSA331_A0330
32COXBURSA331_A2024 1847047..1847394 [+], 348161830281hypothetical protein  COXBURSA331_A2024
33COXBURSA331_A1529 1397687..1398706 [+], 1020161830285transposase for insertion sequence element IS1111A  COXBURSA331_A1529
34COXBURSA331_A1652 1512060..1513079 [-], 1020161830304transposase for insertion sequence element IS1111A  COXBURSA331_A1652
35COXBURSA331_A1296 1168077..1169096 [+], 1020161830406transposase for insertion sequence element IS1111A  COXBURSA331_A1296
36COXBURSA331_A1676 1529814..1530833 [+], 1020161830440transposase for insertion sequence element IS1111A  COXBURSA331_A1676
37COXBURSA331_A1419 1297843..1298862 [-], 1020161830443transposase for insertion sequence element IS1111A  COXBURSA331_A1419
38COXBURSA331_A1155 1036503..1037897 [+], 1395161830568hypothetical protein  COXBURSA331_A1155
39COXBURSA331_A0714 625320..626339 [+], 1020161830569transposase for insertion sequence element IS1111A  COXBURSA331_A0714
40COXBURSA331_A0120 105498..107399 [-], 1902161830579hypothetical protein  COXBURSA331_A0120
41COXBURSA331_A1585 1450796..1451248 [-], 453161830584surface antigen  COXBURSA331_A1585
42COXBURSA331_A0893 795831..795944 [+], 114161830585hypothetical protein  COXBURSA331_A0893
43COXBURSA331_A0265 (pkn2)230798..231538 [+], 741161830586serine/threonine-protein kinase pkn2  COXBURSA331_A0265
44COXBURSA331_A1338 1211257..1212276 [+], 1020161830618transposase for insertion sequence element IS1111A  COXBURSA331_A1338
45COXBURSA331_A0612 519844..520908 [-], 1065161830678transposase for insertion sequence element IS1111A  COXBURSA331_A0612
46COXBURSA331_A1949 1776470..1778305 [-], 1836161830702ankyrin repeat-containing protein  AnkM
47COXBURSA331_A0369 316431..317651 [+], 1221161830716trans-2-enoyl-CoA reductase  COXBURSA331_A0369
48COXBURSA331_A1727 1577598..1578164 [-], 567161830722hypothetical protein  COXBURSA331_A1727
49COXBURSA331_A0031 28817..29746 [+], 930161830734hypothetical protein  COXBURSA331_A0031
50COXBURSA331_A1778 1624842..1625861 [-], 1020161830762transposase for insertion sequence element IS1111A  COXBURSA331_A1778
51COXBURSA331_A0218 188856..189836 [+], 981161830769hypothetical protein  COXBURSA331_A0218
52COXBURSA331_A1835 1673918..1674937 [-], 1020161830843transposase for insertion sequence element IS1111A  COXBURSA331_A1835
53COXBURSA331_A1358 1236969..1238096 [+], 1128161830865hypothetical protein  COXBURSA331_A1358
54COXBURSA331_A2189 1991494..1992747 [+], 1254161830882phosphate transporter family protein  COXBURSA331_A2189
55COXBURSA331_A1821 1663418..1664317 [-], 900161830891hypothetical protein  COXBURSA331_A1821
56COXBURSA331_A0155 134615..135634 [-], 1020161830920transposase for insertion sequence element IS1111A  COXBURSA331_A0155
57COXBURSA331_A0636 544598..545617 [-], 1020161830936transposase for insertion sequence element IS1111A  COXBURSA331_A0636
58COXBURSA331_A2103 1911655..1912674 [+], 1020161830964transposase for insertion sequence element IS1111A  COXBURSA331_A2103
59COXBURSA331_A1066 946940..947605 [+], 666161830997hypothetical protein  COXBURSA331_A1066
60COXBURSA331_A1839 1677316..1678335 [-], 1020161831109transposase for insertion sequence element IS1111A  COXBURSA331_A1839
61COXBURSA331_A1726 1577328..1577420 [+], 93161831174hypothetical protein  COXBURSA331_A1726
62COXBURSA331_A1406 1286836..1287855 [+], 1020161831177transposase for insertion sequence element IS1111A  COXBURSA331_A1406
63COXBURSA331_A0532 453305..454672 [-], 1368161831191hypothetical protein  COXBURSA331_A0532
64COXBURSA331_A0237 205231..206280 [+], 1050161831202ankyrin repeat-containing protein  AnkB
65COXBURSA331_A0007 6780..7799 [+], 1020161831254transposase for insertion sequence element IS1111A  COXBURSA331_A0007
66COXBURSA331_A0399 (algC)336863..338278 [+], 1416161831294phosphomannomutase  COXBURSA331_A0399
67COXBURSA331_A1962 1789844..1790461 [-], 618161831309hypothetical protein  COXBURSA331_A1962
68COXBURSA331_A0518 442349..444085 [-], 1737161831313hypothetical protein  COXBURSA331_A0518
69COXBURSA331_A1591 1457374..1458393 [+], 1020161831320transposase for insertion sequence element IS1111A  COXBURSA331_A1591
70COXBURSA331_A1361 1238426..1239445 [+], 1020161831340transposase for insertion sequence element IS1111A  COXBURSA331_A1361
71COXBURSA331_A1568 1437360..1438379 [-], 1020161831422transposase for insertion sequence element IS1111A  COXBURSA331_A1568
72COXBURSA331_A1963 1790835..1791854 [-], 1020161831444transposase for insertion sequence element IS1111A  COXBURSA331_A1963
73COXBURSA331_A1743 1592626..1594329 [+], 1704161831462hypothetical protein  COXBURSA331_A1743
74COXBURSA331_A1848 1684523..1685542 [+], 1020161831468transposase for insertion sequence element IS1111A  COXBURSA331_A1848
75COXBURSA331_A0847 757992..759011 [-], 1020161831491transposase for insertion sequence element IS1111A  COXBURSA331_A0847
76COXBURSA331_A1976 1799212..1800231 [+], 1020161831518transposase for insertion sequence element IS1111A  COXBURSA331_A1976
77COXBURSA331_A2197 1998188..1999207 [-], 1020161831521transposase for insertion sequence element IS1111A  COXBURSA331_A2197
78COXBURSA331_A2023 1845696..1846745 [+], 1050161831524hypothetical protein  COXBURSA331_A2023
79COXBURSA331_A1952 1779190..1780209 [+], 1020161831546transposase for insertion sequence element IS1111A  COXBURSA331_A1952
80COXBURSA331_A1944 1771448..1772710 [+], 1263161831575hypothetical protein  COXBURSA331_A1944


Download FASTA format files
Proteins        Genes
Identified as part of this study from NC_010117

Genomics & Bioinformatics Group in MML, SJTU