Detailed information NTG0998250

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABEG09_RS10855
• Genome accession: NZ_CP155637
• Coordinates: 2252601..2253302 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain TY918
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2247601..2258302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEG09_RS10825 (ABEG09_10825)	-	2247907..2248350 (-)	444	WP_001246675.1	SRPBCC family protein	-
ABEG09_RS10830 (ABEG09_10830)	tadA	2248420..2248923 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABEG09_RS10835 (ABEG09_10835)	-	2248930..2250054 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABEG09_RS10840 (ABEG09_10840)	ung	2250051..2250764 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABEG09_RS10845 (ABEG09_10845)	-	2250815..2251411 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABEG09_RS10850 (ABEG09_10850)	gspK	2251642..2252601 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABEG09_RS10855 (ABEG09_10855)	xcpW	2252601..2253302 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABEG09_RS10860 (ABEG09_10860)	xcpV	2253302..2253682 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABEG09_RS10865 (ABEG09_10865)	-	2253672..2254226 (-)	555	WP_000841373.1	type II secretion system protein	-
ABEG09_RS10870 (ABEG09_10870)	-	2254236..2254844 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABEG09_RS10875 (ABEG09_10875)	-	2254882..2255655 (-)	774	WP_000497298.1	TatD family hydrolase	-
ABEG09_RS10880 (ABEG09_10880)	-	2255673..2256014 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ABEG09_RS10885 (ABEG09_10885)	-	2256026..2257006 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABEG09_RS10890 (ABEG09_10890)	kdsB	2257018..2257779 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=998250 ABEG09_RS10855 WP_000594589.1 2252601..2253302(-) (xcpW) [Acinetobacter baumannii strain TY918]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=998250 ABEG09_RS10855 WP_000594589.1 2252601..2253302(-) (xcpW) [Acinetobacter baumannii strain TY918]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996