Detailed information NTG0099762

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CJ8421_RS05710
• Genome accession: NZ_CP005388
• Coordinates: 1081226..1082209 (+)
• Length: 327 a.a.
• NCBI ID: WP_032592455.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni CG8421
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1076226..1087209

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJ8421_RS05685	-	1076576..1077597 (-)	1022	Protein_1093	hypothetical protein	-
CJ8421_RS05690 (CJ8421_05705)	-	1077668..1078441 (+)	774	WP_002860236.1	glycosyltransferase family 25 protein	-
CJ8421_RS05695 (CJ8421_05710)	wlaTB	1078434..1079390 (+)	957	WP_002860237.1	class E lipooligosaccharide biosynthesis protein WlaTB	-
CJ8421_RS05700 (CJ8421_05715)	wlaTC	1079387..1080346 (+)	960	WP_002860238.1	class E lipooligosaccharide biosynthesis protein WlaTC	-
CJ8421_RS05705 (CJ8421_05720)	-	1080349..1081167 (-)	819	WP_032592453.1	glycosyltransferase family 2 protein	-
CJ8421_RS05710 (CJ8421_05725)	waaF	1081226..1082209 (+)	984	WP_032592455.1	lipopolysaccharide heptosyltransferase II	Regulator
CJ8421_RS05715 (CJ8421_05730)	gmhA	1082162..1082725 (-)	564	WP_002860241.1	D-sedoheptulose 7-phosphate isomerase	-
CJ8421_RS05720 (CJ8421_05735)	rfaE1	1082722..1084107 (-)	1386	WP_002901184.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CJ8421_RS05725 (CJ8421_05740)	rfaD	1084100..1085053 (-)	954	WP_002860242.1	ADP-glyceromanno-heptose 6-epimerase	-
CJ8421_RS05730 (CJ8421_05745)	gmhB	1085054..1085615 (-)	562	Protein_1102	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CJ8421_RS05735 (CJ8421_05750)	-	1085696..1085998 (+)	303	WP_002852762.1	cytochrome c	-
CJ8421_RS05740 (CJ8421_05755)	ccoS	1086021..1086227 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 37493.15 Da
• Isoelectric Point: 10.0592

>NTDB_id=99762 CJ8421_RS05710 WP_032592455.1 1081226..1082209(+) (waaF) [Campylobacter jejuni subsp. jejuni CG8421]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKLQDPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKSEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKTLIDD
LTKCVYD

Nucleotide

• Length: 984 bp

>NTDB_id=99762 CJ8421_RS05710 WP_032592455.1 1081226..1082209(+) (waaF) [Campylobacter jejuni subsp. jejuni CG8421]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAACTTCAAGACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAATCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAATCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAACAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAACTCTCATCGATGAT
CTGACAAAGTGTGTGTATGATTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.968	96.33	0.905