Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | ABC812_RS09015 | Genome accession | NZ_CP155537 |
| Coordinates | 1758977..1759372 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain DP1322 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1753977..1764372
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC812_RS08990 (ABC812_08985) | - | 1754318..1754851 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| ABC812_RS08995 (ABC812_08990) | - | 1755205..1755411 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| ABC812_RS09000 (ABC812_08995) | - | 1755571..1756800 (+) | 1230 | WP_000436473.1 | ISL3 family transposase | - |
| ABC812_RS09005 (ABC812_09000) | groL | 1756899..1758521 (-) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| ABC812_RS09010 (ABC812_09005) | groES | 1758537..1758821 (-) | 285 | WP_000917304.1 | co-chaperone GroES | - |
| ABC812_RS09015 (ABC812_09010) | ssbB/cilA | 1758977..1759372 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| ABC812_RS09020 (ABC812_09015) | - | 1759450..1760211 (-) | 762 | WP_001107755.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| ABC812_RS09025 (ABC812_09020) | ytpR | 1760244..1760870 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| ABC812_RS09030 (ABC812_09025) | - | 1760886..1761203 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| ABC812_RS09035 (ABC812_09030) | - | 1761200..1761499 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| ABC812_RS09040 (ABC812_09035) | - | 1761593..1761724 (+) | 132 | WP_001811306.1 | hypothetical protein | - |
| ABC812_RS09045 (ABC812_09040) | - | 1761749..1761811 (-) | 63 | WP_219300018.1 | hypothetical protein | - |
| ABC812_RS09050 (ABC812_09045) | - | 1761836..1762027 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| ABC812_RS09055 (ABC812_09050) | - | 1762188..1762862 (-) | 675 | WP_000725742.1 | membrane protein | - |
| ABC812_RS09060 (ABC812_09055) | - | 1762868..1763314 (-) | 447 | WP_000776587.1 | LytTR family DNA-binding domain-containing protein | - |
| ABC812_RS09065 (ABC812_09060) | - | 1763428..1763931 (-) | 504 | WP_000800927.1 | phosphatase PAP2 family protein | - |
| ABC812_RS09070 (ABC812_09065) | - | 1763928..1764290 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=997499 ABC812_RS09015 WP_000282467.1 1758977..1759372(-) (ssbB/cilA) [Streptococcus pneumoniae strain DP1322]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=997499 ABC812_RS09015 WP_000282467.1 1758977..1759372(-) (ssbB/cilA) [Streptococcus pneumoniae strain DP1322]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |