Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | ABC804_RS01400 | Genome accession | NZ_CP155536 |
| Coordinates | 263428..263754 (+) | Length | 108 a.a. |
| NCBI ID | WP_000738636.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain M264-3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 258428..268754
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC804_RS01375 (ABC804_01375) | nagA | 258557..259708 (+) | 1152 | WP_001134457.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| ABC804_RS01380 (ABC804_01380) | - | 259871..260929 (+) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| ABC804_RS01385 (ABC804_01385) | - | 261080..261445 (+) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| ABC804_RS01390 (ABC804_01390) | comGA/cglA/cilD | 261521..262462 (+) | 942 | WP_000249552.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABC804_RS01395 (ABC804_01395) | comGB/cglB | 262410..263426 (+) | 1017 | WP_074017570.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABC804_RS01400 (ABC804_01400) | comGC/cglC | 263428..263754 (+) | 327 | WP_000738636.1 | comG operon protein ComGC | Machinery gene |
| ABC804_RS01405 (ABC804_01405) | comGD/cglD | 263747..264151 (+) | 405 | WP_000588013.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABC804_RS01410 (ABC804_01410) | comGE/cglE | 264114..264416 (+) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABC804_RS01415 (ABC804_01415) | comGF/cglF | 264379..264840 (+) | 462 | WP_000250542.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABC804_RS01420 (ABC804_01420) | comGG/cglG | 264818..265231 (+) | 414 | WP_000265624.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ABC804_RS01425 (ABC804_01425) | - | 265368..265962 (+) | 595 | Protein_258 | methyltransferase domain-containing protein | - |
| ABC804_RS01430 (ABC804_01430) | comYH | 266023..266976 (+) | 954 | WP_000345099.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ABC804_RS01435 (ABC804_01435) | - | 267027..268217 (+) | 1191 | WP_000167765.1 | acetate kinase | - |
| ABC804_RS01440 (ABC804_01440) | - | 268218..268349 (+) | 132 | WP_000768904.1 | hypothetical protein | - |
| ABC804_RS01445 (ABC804_01445) | rnpA | 268366..268737 (+) | 372 | WP_000739244.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12208.39 Da Isoelectric Point: 10.0305
>NTDB_id=997397 ABC804_RS01400 WP_000738636.1 263428..263754(+) (comGC/cglC) [Streptococcus pneumoniae strain M264-3]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKE
DGRITEEQAKAYKEYNDKNVGANRKVND
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKE
DGRITEEQAKAYKEYNDKNVGANRKVND
Nucleotide
Download Length: 327 bp
>NTDB_id=997397 ABC804_RS01400 WP_000738636.1 263428..263754(+) (comGC/cglC) [Streptococcus pneumoniae strain M264-3]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTAAAAGAA
GATGGACGCATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACAATGATAAAAATGTGGGAGCAAATCGTAAAGTCAA
TGATTAA
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTAAAAGAA
GATGGACGCATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACAATGATAAAAATGTGGGAGCAAATCGTAAAGTCAA
TGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
96.296 |
100 |
0.963 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
95.37 |
100 |
0.954 |
| comGC/cglC | Streptococcus pneumoniae D39 |
95.37 |
100 |
0.954 |
| comGC/cglC | Streptococcus pneumoniae R6 |
95.37 |
100 |
0.954 |
| comGC/cglC | Streptococcus mitis SK321 |
92.593 |
100 |
0.926 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
93.878 |
90.741 |
0.852 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
71.875 |
88.889 |
0.639 |
| comYC | Streptococcus mutans UA159 |
62.745 |
94.444 |
0.593 |
| comYC | Streptococcus mutans UA140 |
62.745 |
94.444 |
0.593 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
54.902 |
94.444 |
0.519 |
| comYC | Streptococcus suis isolate S10 |
67.901 |
75 |
0.509 |
| comGC | Staphylococcus aureus MW2 |
48.837 |
79.63 |
0.389 |
| comGC | Staphylococcus aureus N315 |
48.837 |
79.63 |
0.389 |
| comGC | Latilactobacillus sakei subsp. sakei 23K |
45.349 |
79.63 |
0.361 |