Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   KKKWG1_RS04310 Genome accession   NZ_LN869922
Coordinates   825770..826474 (-) Length   234 a.a.
NCBI ID   WP_003789586.1    Uniprot ID   -
Organism   Kingella kingae strain KWG1     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 820770..831474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KKKWG1_RS04275 (KKKWG1_0873) - 820912..821202 (+) 291 WP_019389369.1 hypothetical protein -
  KKKWG1_RS04280 (KKKWG1_0874) pgl 821236..821934 (+) 699 WP_019389368.1 6-phosphogluconolactonase -
  KKKWG1_RS04285 (KKKWG1_0875) - 821915..822919 (+) 1005 WP_019389367.1 glucokinase -
  KKKWG1_RS04290 - 822898..823080 (-) 183 WP_019389366.1 hypothetical protein -
  KKKWG1_RS04295 (KKKWG1_0876) aroG 823077..824129 (-) 1053 WP_003785571.1 3-deoxy-7-phosphoheptulonate synthase AroG -
  KKKWG1_RS04300 (KKKWG1_0877) - 824390..824752 (-) 363 WP_003789582.1 hypothetical protein -
  KKKWG1_RS04305 (KKKWG1_0878) - 824882..825709 (-) 828 WP_060537225.1 undecaprenyl-diphosphate phosphatase -
  KKKWG1_RS04310 (KKKWG1_0879) dsbA2 825770..826474 (-) 705 WP_003789586.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  KKKWG1_RS04315 (KKKWG1_0880) - 826514..827374 (-) 861 WP_060536994.1 SPOR domain-containing protein -
  KKKWG1_RS04320 (KKKWG1_0881) - 827439..828233 (-) 795 WP_019389363.1 3'-5' exonuclease -
  KKKWG1_RS04325 (KKKWG1_0882) - 828384..829199 (+) 816 WP_026036245.1 DsbC family protein -
  KKKWG1_RS04330 (KKKWG1_0883) - 829399..829650 (+) 252 WP_019389360.1 BolA/IbaG family iron-sulfur metabolism protein -
  KKKWG1_RS04335 (KKKWG1_0884) - 829732..830640 (+) 909 WP_019389359.1 tyrosine-type recombinase/integrase -
  KKKWG1_RS04340 (KKKWG1_0885) - 830637..831080 (+) 444 WP_019389358.1 CopD family copper resistance protein -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 25650.39 Da        Isoelectric Point: 8.4456

>NTDB_id=992305 KKKWG1_RS04310 WP_003789586.1 825770..826474(-) (dsbA2) [Kingella kingae strain KWG1]
MLNKKSIAAALMALFVSVPALAATEGVDYKLAEVEVAPLQKDKIEVTEFFAYWCPHCYDLELVIARHIKTFASDTVFRAE
HVVWDKQRDFGFARLAAAVKQSGTKIQANPLIFEAVVKQKVNLGNPAVLSQWLKAQNAFDGSKVQAAFDSFSNATQATQM
ESWTDQYAISGTPTVIVGGKYQVIFNNGYEAGMTTIDELIKKVREERGMKAPAPKAATTPTHSFGASLVNSVNR

Nucleotide


Download         Length: 705 bp        

>NTDB_id=992305 KKKWG1_RS04310 WP_003789586.1 825770..826474(-) (dsbA2) [Kingella kingae strain KWG1]
ATGTTGAATAAAAAAAGTATTGCCGCCGCATTGATGGCGTTGTTTGTATCTGTTCCTGCTTTGGCAGCCACCGAAGGCGT
GGACTATAAACTTGCCGAAGTGGAAGTTGCACCCCTGCAAAAAGACAAAATTGAAGTAACCGAATTTTTTGCATACTGGT
GTCCACATTGCTATGACCTAGAACTCGTTATTGCACGTCATATCAAAACCTTTGCCAGCGACACCGTATTCCGCGCGGAA
CACGTTGTGTGGGATAAACAACGCGATTTTGGTTTTGCACGTCTTGCCGCAGCGGTGAAACAATCGGGTACAAAAATACA
AGCCAACCCATTGATTTTTGAAGCCGTAGTCAAACAAAAAGTCAATTTAGGCAACCCAGCCGTTTTGTCGCAATGGCTCA
AAGCACAAAACGCATTCGATGGCAGCAAAGTGCAGGCTGCTTTTGATTCGTTCAGCAACGCCACACAAGCCACACAAATG
GAATCATGGACAGACCAATACGCCATTTCTGGCACACCAACCGTGATTGTGGGCGGCAAATACCAAGTTATTTTCAACAA
CGGCTACGAAGCAGGCATGACCACGATTGACGAACTCATCAAAAAAGTACGCGAAGAACGTGGCATGAAAGCCCCGGCAC
CCAAAGCCGCAACCACACCAACTCACAGCTTTGGCGCAAGTTTGGTTAATAGCGTAAATCGTTAA

Domains

Predicted by InterProScan.

Thioredoxin (Thioredoxin_4)

(41-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

53.005

78.205

0.415
  dsbA1 Neisseria meningitidis MC58

49.189

79.06

0.389

Multiple sequence alignment