Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   AAG068_RS06075 Genome accession   NZ_CP152427
Coordinates   1178624..1179307 (+) Length   227 a.a.
NCBI ID   WP_000350711.1    Uniprot ID   A0A2B0Y2P9
Organism   Bacillus paramycoides strain JYZ-SD5     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1173624..1184307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAG068_RS06055 (AAG068_06055) - 1174690..1176336 (+) 1647 WP_342718545.1 peptide ABC transporter substrate-binding protein -
  AAG068_RS06060 (AAG068_06060) - 1176366..1176569 (-) 204 WP_000559978.1 hypothetical protein -
  AAG068_RS06065 (AAG068_06065) spx 1177162..1177557 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  AAG068_RS06070 (AAG068_06070) - 1177607..1178281 (-) 675 WP_342718548.1 TerC family protein -
  AAG068_RS06075 (AAG068_06075) mecA 1178624..1179307 (+) 684 WP_000350711.1 adaptor protein MecA Regulator
  AAG068_RS06080 (AAG068_06080) - 1179380..1180924 (+) 1545 WP_342718549.1 cardiolipin synthase -
  AAG068_RS06085 (AAG068_06085) - 1181005..1182249 (+) 1245 WP_342718550.1 competence protein CoiA family protein -
  AAG068_RS06090 (AAG068_06090) pepF 1182300..1184126 (+) 1827 WP_342718551.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26965.02 Da        Isoelectric Point: 3.9986

>NTDB_id=989315 AAG068_RS06075 WP_000350711.1 1178624..1179307(+) (mecA) [Bacillus paramycoides strain JYZ-SD5]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=989315 AAG068_RS06075 WP_000350711.1 1178624..1179307(+) (mecA) [Bacillus paramycoides strain JYZ-SD5]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTACGACCGCGAACGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAGCTT
TCAAAGGATGGACAAAAGTTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAGGAACAAGCAGGAACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGCCACCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2B0Y2P9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.579

100

0.568


Multiple sequence alignment