Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | NSU13_RS00255 | Genome accession | NZ_CP151986 |
| Coordinates | 47070..47360 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL M8-0049 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 42070..52360
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSU13_RS00215 (NSU13_00215) | - | 42102..42431 (+) | 330 | WP_024425625.1 | cyclic-di-AMP receptor | - |
| NSU13_RS00220 (NSU13_00220) | - | 42444..42884 (+) | 441 | WP_024425626.1 | YaaR family protein | - |
| NSU13_RS00225 (NSU13_00225) | holB | 42896..43885 (+) | 990 | WP_024425627.1 | DNA polymerase III subunit delta' | - |
| NSU13_RS00230 (NSU13_00230) | - | 43888..44715 (+) | 828 | WP_024425628.1 | stage 0 sporulation family protein | - |
| NSU13_RS00235 (NSU13_00235) | yabA | 44730..45083 (+) | 354 | WP_217008956.1 | DNA replication initiation control protein YabA | - |
| NSU13_RS00240 (NSU13_00240) | - | 45139..45882 (+) | 744 | WP_070326877.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| NSU13_RS00245 (NSU13_00245) | - | 45869..46168 (+) | 300 | WP_034284140.1 | GIY-YIG nuclease family protein | - |
| NSU13_RS00250 (NSU13_00250) | rsmI | 46143..47024 (+) | 882 | WP_211044125.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| NSU13_RS00255 (NSU13_00255) | abrB | 47070..47360 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| NSU13_RS00260 (NSU13_00260) | metG | 47881..49881 (+) | 2001 | WP_342489739.1 | methionine--tRNA ligase | - |
| NSU13_RS00265 (NSU13_00265) | - | 49962..50729 (+) | 768 | WP_034624441.1 | TatD family hydrolase | - |
| NSU13_RS00270 (NSU13_00270) | - | 50974..52176 (+) | 1203 | WP_342489740.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=983526 NSU13_RS00255 WP_087975202.1 47070..47360(-) (abrB) [Bacillus sp. FSL M8-0049]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=983526 NSU13_RS00255 WP_087975202.1 47070..47360(-) (abrB) [Bacillus sp. FSL M8-0049]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GTTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAGCTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATTCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GTTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAGCTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATTCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |