Detailed information NTG0979205

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: ACLQ7P_RS06430
• Genome accession: NZ_CP181322
• Coordinates: 1281214..1282131 (+)
• Length: 305 a.a.
• NCBI ID: WP_003232954.1
• Uniprot ID: A0A9W5LHY5
• Organism: Bacillus subtilis subsp. subtilis strain JCK-1398
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1276214..1287131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLQ7P_RS06415 (ACLQ7P_06415)	trpS	1276794..1277786 (-)	993	WP_003245134.1	tryptophan--tRNA ligase	-
ACLQ7P_RS06420 (ACLQ7P_06420)	oppA	1278530..1280167 (+)	1638	WP_014479443.1	oligopeptide ABC transporter substrate-binding protein OppA	-
ACLQ7P_RS06425 (ACLQ7P_06425)	oppB	1280275..1281210 (+)	936	WP_041336625.1	oligopeptide ABC transporter permease OppB	-
ACLQ7P_RS06430 (ACLQ7P_06430)	amiD	1281214..1282131 (+)	918	WP_003232954.1	oligopeptide ABC transporter permease OppC	Regulator
ACLQ7P_RS06435 (ACLQ7P_06435)	oppD	1282136..1283212 (+)	1077	WP_077670618.1	oligopeptide ABC transporter ATP-binding protein OppD	-
ACLQ7P_RS06440 (ACLQ7P_06440)	oppF	1283214..1284131 (+)	918	WP_003245567.1	oligopeptide ABC transporter ATP-binding protein OppF	-
ACLQ7P_RS06445 (ACLQ7P_06445)	yjbB	1284239..1285456 (+)	1218	WP_416247643.1	MFS transporter	-
ACLQ7P_RS06450 (ACLQ7P_06450)	yjbC	1285620..1286198 (+)	579	WP_003224597.1	GNAT family N-acetyltransferase	-
ACLQ7P_RS06455 (ACLQ7P_06455)	spx	1286379..1286774 (+)	396	WP_014476435.1	transcriptional regulator Spx	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33621.12 Da
• Isoelectric Point: 10.2873

>NTDB_id=979205 ACLQ7P_RS06430 WP_003232954.1 1281214..1282131(+) (amiD) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMVGLIIIVLIILMAIFAPMFSRYDYSTTNLLNADKPP
SKDHWFGTDDLGRDIFVRTWVGARISIFIGVAAAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVPSLLMVILLMV
VLPKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLASQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEA
FLSYLGLGVPAPLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=979205 ACLQ7P_RS06430 WP_003232954.1 1281214..1282131(+) (amiD) [Bacillus subtilis subsp. subtilis strain JCK-1398]
ATGCAGAACATTCCGAAAAACATGTTTGAACCAGCCGCAGCGAATGCCGGCGATGCAGAAAAAATAAGTAAAAAGAGCCT
TTCCCTCTGGAAAGATGCGATGCTTCGCTTCCGCAGCAATAAGCTTGCAATGGTCGGGCTTATTATTATCGTGCTCATTA
TCCTTATGGCAATTTTTGCGCCGATGTTCTCAAGGTATGATTATTCAACTACTAATCTCTTAAATGCGGATAAGCCCCCT
TCAAAAGATCACTGGTTCGGAACAGATGATCTTGGGCGGGACATTTTCGTCCGTACATGGGTAGGGGCGCGAATCTCAAT
CTTTATCGGTGTTGCAGCCGCTGTTCTTGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGCA
GAACGGACGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTT
GTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACGGGCTGGATTAATATGGCCAGAATCGTGCGCGG
ACAAGTGCTGCAGCTGAAGAATCAGGAGTATGTGCTTGCTTCACAGACACTGGGTGCAAAAACATCCCGTCTTCTGTTTA
AACATATCGTGCCAAACGCAATGGGTTCTATTTTGGTCACGATGACACTGACAGTTCCTACTGCGATTTTTACAGAAGCC
TTTTTAAGCTATTTGGGACTCGGTGTTCCGGCTCCGCTGGCAAGCTGGGGAACGATGGCTTCTGACGGATTGCCTGCATT
GACCTATTATCCGTGGCGTTTATTCTTCCCTGCCGGATTTATCTGCATTACAATGTTTGGCTTTAACGTTGTCGGCGACG
GATTAAGAGACGCATTGGATCCTAAGTTACGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-79)

3D structure

• AlphaFold DB: A0A9W5LHY5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	35.922	100	0.364
amiD	Streptococcus thermophilus LMD-9	35.922	100	0.364