Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | R8563_RS09805 | Genome accession | NZ_AP026917 |
| Coordinates | 1878701..1879003 (-) | Length | 100 a.a. |
| NCBI ID | WP_000413380.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PZ900700007 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1873701..1884003
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8563_RS09770 (PC0007_18910) | rnpA | 1874381..1874752 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| R8563_RS09775 | - | 1874769..1874900 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| R8563_RS09780 (PC0007_18920) | - | 1874901..1876091 (-) | 1191 | WP_000167768.1 | acetate kinase | - |
| R8563_RS09785 (PC0007_18930) | comYH | 1876142..1877095 (-) | 954 | WP_000345086.1 | class I SAM-dependent methyltransferase | Machinery gene |
| R8563_RS09790 | - | 1877156..1877750 (-) | 595 | Protein_1901 | class I SAM-dependent methyltransferase | - |
| R8563_RS09795 (PC0007_18960) | comGG/cglG | 1877853..1878299 (-) | 447 | WP_001811371.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| R8563_RS09800 (PC0007_18970) | comGF/cglF | 1878277..1878738 (-) | 462 | WP_000250523.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| R8563_RS09805 (PC0007_18980) | comGE/cglE | 1878701..1879003 (-) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| R8563_RS09810 (PC0007_18990) | comGD/cglD | 1878966..1879370 (-) | 405 | WP_000588023.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| R8563_RS09815 (PC0007_19000) | comGC/cglC | 1879363..1879689 (-) | 327 | WP_000738621.1 | comG operon protein ComGC | Machinery gene |
| R8563_RS09820 (PC0007_19010) | comGB/cglB | 1879691..1880707 (-) | 1017 | WP_074017570.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| R8563_RS09825 (PC0007_19020) | comGA/cglA/cilD | 1880655..1881596 (-) | 942 | WP_000249568.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| R8563_RS09830 (PC0007_19030) | - | 1881672..1882037 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| R8563_RS09835 (PC0007_19040) | - | 1882188..1883246 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11135.11 Da Isoelectric Point: 9.7273
>NTDB_id=97750 R8563_RS09805 WP_000413380.1 1878701..1879003(-) (comGE/cglE) [Streptococcus pneumoniae strain PZ900700007]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVNINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVNINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=97750 R8563_RS09805 WP_000413380.1 1878701..1879003(-) (comGE/cglE) [Streptococcus pneumoniae strain PZ900700007]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACAGGTCAAAATCAGGTAAACATAAACGGAGTTGAGATTCAGGTGTTTTCT
AGCGAAAAGGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACAGGTCAAAATCAGGTAAACATAAACGGAGTTGAGATTCAGGTGTTTTCT
AGCGAAAAGGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus mitis NCTC 12261 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae Rx1 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae D39 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae R6 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
43.333 |
90 |
0.39 |
| comYE | Streptococcus mutans UA159 |
43.333 |
90 |
0.39 |