Detailed information
Bioinformatically predicted
Overview
| Name | pilZ | Type | Machinery gene |
| Locus tag | RBI96_RS32990 | Genome accession | NZ_CP181075 |
| Coordinates | 7075175..7075531 (+) | Length | 118 a.a. |
| NCBI ID | WP_003091119.1 | Uniprot ID | A0A0H2ZD30 |
| Organism | Pseudomonas aeruginosa strain LACPHL-BACT-2023-00013 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 7070175..7080531
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RBI96_RS32965 (RBI96_032965) | fabF | 7070387..7071631 (+) | 1245 | WP_003104132.1 | beta-ketoacyl-ACP synthase II | - |
| RBI96_RS32970 (RBI96_032970) | pabC | 7071631..7072446 (+) | 816 | WP_003091129.1 | aminodeoxychorismate lyase | - |
| RBI96_RS32975 (RBI96_032975) | mltG | 7072452..7073501 (+) | 1050 | WP_003091127.1 | endolytic transglycosylase MltG | - |
| RBI96_RS32980 (RBI96_032980) | tmk | 7073530..7074162 (+) | 633 | WP_003091125.1 | dTMP kinase | - |
| RBI96_RS32985 (RBI96_032985) | - | 7074155..7075141 (+) | 987 | WP_003091122.1 | DNA polymerase III subunit delta' | - |
| RBI96_RS32990 (RBI96_032990) | pilZ | 7075175..7075531 (+) | 357 | WP_003091119.1 | PilZ domain-containing protein | Machinery gene |
| RBI96_RS32995 (RBI96_032995) | - | 7075546..7076322 (+) | 777 | WP_003091117.1 | TatD family hydrolase | - |
| RBI96_RS33000 (RBI96_033000) | - | 7076548..7077681 (-) | 1134 | WP_003091115.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| RBI96_RS33005 (RBI96_033005) | - | 7077767..7078405 (+) | 639 | WP_003091114.1 | TetR/AcrR family transcriptional regulator | - |
| RBI96_RS33010 (RBI96_033010) | - | 7078555..7078677 (+) | 123 | Protein_6521 | radical SAM protein | - |
| RBI96_RS33015 (RBI96_033015) | gmtY | 7078835..7080217 (+) | 1383 | WP_075117044.1 | gamma-mobile-trio recombinase GmtY | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12903.98 Da Isoelectric Point: 9.9969
>NTDB_id=976507 RBI96_RS32990 WP_003091119.1 7075175..7075531(+) (pilZ) [Pseudomonas aeruginosa strain LACPHL-BACT-2023-00013]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
Nucleotide
Download Length: 357 bp
>NTDB_id=976507 RBI96_RS32990 WP_003091119.1 7075175..7075531(+) (pilZ) [Pseudomonas aeruginosa strain LACPHL-BACT-2023-00013]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilZ | Legionella pneumophila str. Paris |
49.074 |
91.525 |
0.449 |
| pilZ | Legionella pneumophila strain ERS1305867 |
49.074 |
91.525 |
0.449 |