Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | WMY90_RS08995 | Genome accession | NZ_CP150875 |
| Coordinates | 1731252..1731461 (+) | Length | 69 a.a. |
| NCBI ID | WP_002946147.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus strain TCI125 | ||
| Function | processing and transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1726252..1736461
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WMY90_RS08970 (WMY90_08970) | - | 1726689..1727198 (+) | 510 | WP_022096566.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| WMY90_RS08975 (WMY90_08975) | - | 1727510..1728067 (+) | 558 | WP_002946140.1 | ECF transporter S component | - |
| WMY90_RS08980 (WMY90_08980) | - | 1728070..1728720 (+) | 651 | WP_022096567.1 | phosphatase PAP2 family protein | - |
| WMY90_RS08985 (WMY90_08985) | comR | 1728915..1729814 (+) | 900 | WP_002946143.1 | helix-turn-helix domain-containing protein | Regulator |
| WMY90_RS08990 (WMY90_08990) | - | 1730052..1731230 (+) | 1179 | Protein_1721 | ABC transporter transmembrane domain-containing protein | - |
| WMY90_RS08995 (WMY90_08995) | comA | 1731252..1731461 (+) | 210 | WP_002946147.1 | hypothetical protein | Regulator |
| WMY90_RS09000 (WMY90_09000) | - | 1731516..1732084 (+) | 569 | Protein_1723 | ATP-binding cassette domain-containing protein | - |
| WMY90_RS09005 (WMY90_09005) | - | 1732192..1732503 (+) | 312 | WP_022096570.1 | DUF805 domain-containing protein | - |
| WMY90_RS09010 (WMY90_09010) | - | 1732471..1732755 (-) | 285 | WP_232085805.1 | hypothetical protein | - |
| WMY90_RS09015 (WMY90_09015) | - | 1732995..1733891 (-) | 897 | WP_224103642.1 | urease cluster protein | - |
| WMY90_RS09020 (WMY90_09020) | - | 1734296..1734811 (+) | 516 | WP_002949547.1 | AmiS/UreI family transporter | - |
| WMY90_RS09025 (WMY90_09025) | - | 1734836..1735138 (+) | 303 | WP_002886558.1 | urease subunit gamma | - |
| WMY90_RS09030 (WMY90_09030) | - | 1735150..1735461 (+) | 312 | WP_002886559.1 | urease subunit beta | - |
Sequence
Protein
Download Length: 69 a.a. Molecular weight: 8157.54 Da Isoelectric Point: 9.7339
>NTDB_id=973258 WMY90_RS08995 WP_002946147.1 1731252..1731461(+) (comA) [Streptococcus thermophilus strain TCI125]
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ
Nucleotide
Download Length: 210 bp
>NTDB_id=973258 WMY90_RS08995 WP_002946147.1 1731252..1731461(+) (comA) [Streptococcus thermophilus strain TCI125]
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Streptococcus gordonii str. Challis substr. CH1 |
54.167 |
100 |
0.565 |
| comA | Streptococcus mitis NCTC 12261 |
52.778 |
100 |
0.551 |
| comA | Streptococcus pneumoniae Rx1 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae D39 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae R6 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae TIGR4 |
51.389 |
100 |
0.536 |
| comA | Streptococcus mitis SK321 |
50 |
100 |
0.522 |
| comA/nlmT | Streptococcus mutans UA159 |
44.286 |
100 |
0.449 |