Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ACL6EQ_RS20650 Genome accession   NZ_CP178716
Coordinates   3998842..3999669 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain SY1483     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 3993842..4004669
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EQ_RS20625 (ACL6EQ_20625) efpO 3994905..3996347 (+) 1443 WP_137200529.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ACL6EQ_RS20630 (ACL6EQ_20630) tmk 3996344..3996982 (+) 639 WP_015253015.1 dTMP kinase -
  ACL6EQ_RS20635 (ACL6EQ_20635) darA 3997056..3997385 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  ACL6EQ_RS20640 (ACL6EQ_20640) yaaR 3997398..3997838 (+) 441 WP_009966249.1 YaaR family protein -
  ACL6EQ_RS20645 (ACL6EQ_20645) holB 3997850..3998839 (+) 990 WP_413359565.1 DNA polymerase III subunit delta' -
  ACL6EQ_RS20650 (ACL6EQ_20650) yaaT 3998842..3999669 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  ACL6EQ_RS20655 (ACL6EQ_20655) yabA 3999684..4000043 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  ACL6EQ_RS20660 (ACL6EQ_20660) trmNF 4000102..4000845 (+) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ACL6EQ_RS20665 (ACL6EQ_20665) yazA 4000832..4001131 (+) 300 WP_153255572.1 GIY-YIG nuclease family protein -
  ACL6EQ_RS20670 (ACL6EQ_20670) rsmI 4001106..4001984 (+) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACL6EQ_RS20675 (ACL6EQ_20675) abrB 4002033..4002323 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=972919 ACL6EQ_RS20650 WP_003226767.1 3998842..3999669(+) (yaaT) [Bacillus subtilis strain SY1483]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=972919 ACL6EQ_RS20650 WP_003226767.1 3998842..3999669(+) (yaaT) [Bacillus subtilis strain SY1483]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCAGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTCCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGCCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CAGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996