Detailed information NTG0972872

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACL6EQ_RS13190
• Genome accession: NZ_CP178716
• Coordinates: 2535050..2536315 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SY1483
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2530050..2541315

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL6EQ_RS13170 (ACL6EQ_13170)	yrrB	2531421..2532041 (-)	621	WP_202926392.1	tetratricopeptide repeat protein	-
ACL6EQ_RS13175 (ACL6EQ_13175)	mnmA	2532127..2533242 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACL6EQ_RS13180 (ACL6EQ_13180)	iscSA	2533270..2534412 (-)	1143	WP_413358606.1	cysteine desulfurase family protein	-
ACL6EQ_RS13185 (ACL6EQ_13185)	cymR	2534431..2534847 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
ACL6EQ_RS13190 (ACL6EQ_13190)	rarA	2535050..2536315 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
ACL6EQ_RS13195 (ACL6EQ_13195)	tcdA	2536355..2537119 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
ACL6EQ_RS13205 (ACL6EQ_13205)	aspS	2537454..2539232 (-)	1779	WP_413358610.1	aspartate--tRNA ligase	-
ACL6EQ_RS13210 (ACL6EQ_13210)	hisS	2539246..2540520 (-)	1275	WP_032722254.1	histidine--tRNA ligase	-
ACL6EQ_RS13215 (ACL6EQ_13215)	yrzK	2540902..2541072 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=972872 ACL6EQ_RS13190 WP_015714437.1 2535050..2536315(+) (rarA) [Bacillus subtilis strain SY1483]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=972872 ACL6EQ_RS13190 WP_015714437.1 2535050..2536315(+) (rarA) [Bacillus subtilis strain SY1483]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGACTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATTATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATTTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCACTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998