Detailed information NTG0970317

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHH77_RS16105
• Genome accession: NZ_CP150435
• Coordinates: 3137118..3137804 (-)
• Length: 228 a.a.
• NCBI ID: WP_186306801.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-2837
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3132118..3142804

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHH77_RS16070 (MHH77_16070)	fliW	3132252..3132686 (-)	435	WP_339164071.1	flagellar assembly protein FliW	-
MHH77_RS16075 (MHH77_16075)	-	3132714..3133292 (-)	579	WP_012011425.1	DUF6470 family protein	-
MHH77_RS16080 (MHH77_16080)	flgL	3133341..3134252 (-)	912	WP_339164074.1	flagellar hook-associated protein FlgL	-
MHH77_RS16085 (MHH77_16085)	flgK	3134262..3135782 (-)	1521	WP_339164077.1	flagellar hook-associated protein FlgK	-
MHH77_RS16090 (MHH77_16090)	-	3135798..3136280 (-)	483	WP_034660146.1	flagellar protein FlgN	-
MHH77_RS16095 (MHH77_16095)	flgM	3136299..3136562 (-)	264	WP_339164079.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHH77_RS16100 (MHH77_16100)	-	3136642..3137061 (-)	420	WP_034660147.1	TIGR03826 family flagellar region protein	-
MHH77_RS16105 (MHH77_16105)	comFC	3137118..3137804 (-)	687	WP_186306801.1	ComF family protein	Machinery gene
MHH77_RS16110 (MHH77_16110)	-	3137801..3138094 (-)	294	WP_061409760.1	competence protein ComFB	-
MHH77_RS16115 (MHH77_16115)	comFA	3138161..3139540 (-)	1380	WP_339164086.1	DEAD/DEAH box helicase	Machinery gene
MHH77_RS16120 (MHH77_16120)	-	3139660..3140502 (-)	843	WP_058013557.1	DegV family protein	-
MHH77_RS16125 (MHH77_16125)	degU	3140720..3141409 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHH77_RS16130 (MHH77_16130)	degS	3141474..3142649 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26048.38 Da
• Isoelectric Point: 9.8294

>NTDB_id=970317 MHH77_RS16105 WP_186306801.1 3137118..3137804(-) (comFC) [Bacillus sp. FSL K6-2837]
MICLICEGHFVASFTWKSLLLLNDDRLCIACKHRLEKIQRPICPACGRAQSNDQLCQDCSRWKERLDSTTVLVKNRSVYA
YNDLMKDVLSRFKFRGDTALAELFKQDVQAIFKRSFSIKEPVLIPIPLSKERLNERGFNQSVILASLIGQPIQQPLVKIH
QSKQSKKKKNERLDQKGMFQINQTDVIVQRDVILIDDIYTTGATIYDAARILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=970317 MHH77_RS16105 WP_186306801.1 3137118..3137804(-) (comFC) [Bacillus sp. FSL K6-2837]
TTGATCTGCCTAATTTGTGAGGGGCATTTTGTCGCTTCTTTTACATGGAAATCATTACTTCTATTAAATGATGATCGTCT
ATGTATAGCATGTAAGCATCGCCTAGAAAAAATTCAACGCCCGATTTGTCCAGCCTGTGGGAGAGCGCAGTCGAATGATC
AATTATGTCAAGACTGTTCCAGGTGGAAAGAACGCCTTGATTCTACTACAGTACTTGTGAAAAATAGGTCTGTCTATGCT
TACAACGATTTGATGAAAGATGTCCTTTCCCGCTTTAAATTTCGAGGTGATACAGCATTAGCTGAGCTTTTTAAACAAGA
TGTCCAAGCGATATTTAAGCGTTCCTTTTCAATTAAAGAACCTGTACTAATCCCGATTCCTTTAAGTAAAGAAAGACTAA
ATGAAAGAGGGTTTAATCAGTCCGTTATACTTGCTTCCTTGATTGGTCAGCCGATCCAGCAGCCTCTTGTGAAAATACAT
CAAAGCAAACAGTCCAAGAAAAAGAAAAATGAACGTTTAGATCAAAAAGGAATGTTTCAAATCAATCAGACAGATGTGAT
CGTTCAAAGGGATGTTATCTTAATTGACGATATTTATACAACAGGGGCCACCATTTATGATGCGGCGAGAATTTTAAAAG
AAGCAGGTGCCAAAAGTGTTTCCTCATTTACGTTGATCCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (136-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	40	100	0.404
comFC/cflB	Streptococcus mitis NCTC 12261	39.13	100	0.395
comFC/cflB	Streptococcus pneumoniae TIGR4	39.13	100	0.395
comFC/cflB	Streptococcus pneumoniae Rx1	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae D39	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae R6	38.865	100	0.39