Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MKZ05_RS11270 | Genome accession | NZ_CP150255 |
| Coordinates | 2251305..2251640 (+) | Length | 111 a.a. |
| NCBI ID | WP_012010555.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL M8-0277 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2246305..2256640
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKZ05_RS11250 (MKZ05_11250) | gcvT | 2246782..2247879 (-) | 1098 | WP_212045916.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKZ05_RS11255 (MKZ05_11255) | - | 2248442..2250112 (+) | 1671 | WP_212045915.1 | SNF2-related protein | - |
| MKZ05_RS11260 (MKZ05_11260) | - | 2250127..2250924 (+) | 798 | WP_003217448.1 | YqhG family protein | - |
| MKZ05_RS11265 (MKZ05_11265) | - | 2251107..2251271 (+) | 165 | WP_003217357.1 | anti-repressor SinI family protein | - |
| MKZ05_RS11270 (MKZ05_11270) | sinR | 2251305..2251640 (+) | 336 | WP_012010555.1 | transcriptional regulator SinR | Regulator |
| MKZ05_RS11275 (MKZ05_11275) | - | 2251708..2252508 (-) | 801 | WP_003217403.1 | TasA family protein | - |
| MKZ05_RS11280 (MKZ05_11280) | - | 2252566..2253138 (-) | 573 | WP_003217306.1 | signal peptidase I | - |
| MKZ05_RS11285 (MKZ05_11285) | tapA | 2253190..2253717 (-) | 528 | WP_212045914.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKZ05_RS11290 (MKZ05_11290) | - | 2254017..2254295 (+) | 279 | WP_249118272.1 | DUF3889 domain-containing protein | - |
| MKZ05_RS11295 (MKZ05_11295) | - | 2254329..2254523 (-) | 195 | WP_034620826.1 | YqzE family protein | - |
| MKZ05_RS11300 (MKZ05_11300) | comGG | 2254583..2254966 (-) | 384 | WP_212045913.1 | competence type IV pilus minor pilin ComGG | - |
| MKZ05_RS11305 (MKZ05_11305) | comGF | 2254963..2255463 (-) | 501 | WP_212045912.1 | competence type IV pilus minor pilin ComGF | - |
| MKZ05_RS11310 (MKZ05_11310) | comGE | 2255402..2255719 (-) | 318 | WP_003217390.1 | competence type IV pilus minor pilin ComGE | - |
| MKZ05_RS11315 (MKZ05_11315) | comGD | 2255703..2256149 (-) | 447 | WP_212045911.1 | competence type IV pilus minor pilin ComGD | - |
| MKZ05_RS11320 (MKZ05_11320) | comGC | 2256142..2256435 (-) | 294 | WP_212045910.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 13001.59 Da Isoelectric Point: 5.2831
>NTDB_id=968083 MKZ05_RS11270 WP_012010555.1 2251305..2251640(+) (sinR) [Bacillus sp. FSL M8-0277]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=968083 MKZ05_RS11270 WP_012010555.1 2251305..2251640(+) (sinR) [Bacillus sp. FSL M8-0277]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |