Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   NST45_RS11845 Genome accession   NZ_CP150224
Coordinates   2676774..2678525 (+) Length   583 a.a.
NCBI ID   WP_036677198.1    Uniprot ID   A0A1R0X3U7
Organism   Paenibacillus sp. FSL R7-0163     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2671774..2683525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST45_RS11825 (NST45_11825) - 2672750..2673601 (-) 852 WP_036677189.1 aldo/keto reductase -
  NST45_RS11830 (NST45_11830) - 2673638..2674603 (-) 966 WP_036677191.1 aldo/keto reductase -
  NST45_RS11835 (NST45_11835) - 2674928..2675602 (+) 675 WP_036677195.1 response regulator transcription factor -
  NST45_RS11840 (NST45_11840) - 2675599..2676654 (+) 1056 WP_081383663.1 HAMP domain-containing sensor histidine kinase -
  NST45_RS11845 (NST45_11845) rcrP 2676774..2678525 (+) 1752 WP_036677198.1 ABC transporter ATP-binding protein Regulator
  NST45_RS11850 (NST45_11850) rcrQ 2678525..2680285 (+) 1761 WP_036677200.1 ABC transporter ATP-binding protein Regulator
  NST45_RS11855 (NST45_11855) - 2680388..2681950 (-) 1563 WP_076141243.1 ABC transporter substrate-binding protein -
  NST45_RS11860 (NST45_11860) - 2682041..2682976 (-) 936 WP_081383287.1 carbohydrate ABC transporter permease -

Sequence


Protein


Download         Length: 583 a.a.        Molecular weight: 63919.48 Da        Isoelectric Point: 7.1913

>NTDB_id=966880 NST45_RS11845 WP_036677198.1 2676774..2678525(+) (rcrP) [Paenibacillus sp. FSL R7-0163]
MVTILKYLKPKEWALIGISILFIVTQVWLDLELPGYMSEITRLVQIPGSEMSEIIAAGGWMLLCALGSLATSIIVAGIAA
KIAANFSSRLRSKLFDKVQSFSMEEINNFSTASLITRSTNDITQVQMLIVIGLQLLVKAPILAVWAMLKITGKSWQWSLA
TGVAIGVLILIVGIVIVLVLPKFQKLQQLTDNLNRVARENLTGLRVIRAYNAESYQEDKFSVANSELTRTNLFANNVLSM
MMPSISLIMSGLSLAIYWIGAILIQNANGTAKMGLFSDMIVFSSYAMQVVMAFMMLIMIFILMPRAHVSAKRINEVLDTK
PSLENGSLTTSKTNRLGEVEFKKVSFKYPDAEEYVIEDISFTVKKGETVAFIGSTGCGKSTVVNLIPRFYDATAGEVLVD
GINVNQYEQTALRNKMGYVSQKAILFGGTVSSNVAFGDNGSDLSSDVVDAIYTSQASDFVEKMEGSYEAHVSQGGTNLSG
GQKQRLSIARAIARCPEILIFDDSFSALDYKTDRKLRSELKKKSSGTTILIVAQRIGTIKDADKIIVLEAGRMAGMGTHD
ELMQTCDVYQEIAYSQLSKEELA

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=966880 NST45_RS11845 WP_036677198.1 2676774..2678525(+) (rcrP) [Paenibacillus sp. FSL R7-0163]
ATGGTAACTATACTTAAGTACTTAAAACCGAAGGAATGGGCCCTAATCGGTATCAGCATCCTATTCATTGTTACACAGGT
ATGGTTGGATCTGGAATTGCCCGGTTATATGAGCGAGATTACTCGTCTTGTACAGATACCAGGAAGCGAAATGAGCGAAA
TCATTGCAGCCGGAGGCTGGATGTTGCTCTGTGCCCTCGGCAGCTTAGCCACATCAATCATAGTGGCAGGGATCGCCGCT
AAAATTGCCGCTAACTTCTCTTCAAGATTACGCTCCAAATTGTTTGATAAGGTACAGTCTTTTTCTATGGAAGAAATCAA
CAACTTCTCTACAGCTAGTTTAATTACCCGTTCAACGAATGACATTACACAAGTGCAAATGCTGATTGTCATTGGTCTGC
AACTGCTGGTGAAGGCTCCCATCCTTGCCGTTTGGGCAATGCTCAAAATTACAGGCAAGAGTTGGCAGTGGTCGCTTGCT
ACCGGTGTCGCAATTGGGGTATTGATTCTTATTGTCGGCATAGTGATCGTGCTTGTGCTTCCGAAATTCCAAAAATTGCA
GCAACTGACTGATAATCTTAATCGTGTTGCAAGAGAGAATCTTACCGGTCTTCGTGTCATTCGTGCTTATAATGCGGAAA
GTTACCAGGAAGATAAATTTAGCGTAGCCAACAGCGAGCTTACCCGAACGAATTTATTTGCCAACAATGTACTGTCCATG
ATGATGCCAAGTATTTCTCTCATTATGAGCGGTTTAAGTCTCGCAATATATTGGATTGGTGCTATTTTGATTCAAAATGC
CAATGGTACGGCGAAGATGGGCTTATTTTCAGATATGATTGTCTTCTCATCCTATGCGATGCAGGTGGTTATGGCATTCA
TGATGCTGATCATGATTTTTATCCTGATGCCTCGTGCCCATGTATCCGCTAAAAGAATCAATGAAGTGTTGGATACTAAG
CCAAGCTTAGAGAACGGATCACTTACTACCTCCAAGACAAATCGGTTGGGTGAAGTCGAATTCAAAAAAGTCAGCTTTAA
ATATCCGGATGCAGAAGAATACGTTATTGAGGATATCAGCTTTACGGTGAAAAAAGGAGAAACTGTGGCCTTCATCGGTT
CAACCGGATGCGGAAAAAGTACTGTAGTGAACCTGATCCCTCGCTTTTATGATGCTACAGCAGGTGAAGTGTTGGTGGAC
GGTATTAATGTTAACCAATATGAGCAAACTGCACTGCGCAATAAAATGGGATATGTATCTCAGAAAGCGATTTTGTTTGG
CGGCACGGTGAGCTCTAATGTTGCTTTTGGCGACAATGGCAGTGATCTGTCCTCTGATGTTGTAGATGCCATTTACACCT
CTCAAGCTTCAGATTTTGTTGAAAAGATGGAAGGAAGCTACGAGGCTCATGTCTCTCAAGGCGGTACGAACTTGTCTGGC
GGTCAAAAGCAACGTCTTTCCATTGCCCGAGCCATTGCCCGTTGTCCTGAAATATTGATCTTCGACGATTCCTTCTCAGC
ACTTGATTATAAGACGGATCGCAAATTGCGTAGTGAATTGAAGAAGAAATCTAGCGGTACGACGATACTAATCGTTGCGC
AGCGGATCGGTACAATCAAAGACGCAGATAAAATCATTGTACTGGAAGCCGGACGAATGGCAGGCATGGGAACACATGAT
GAATTGATGCAGACCTGTGATGTCTACCAAGAGATTGCTTACTCACAACTTTCAAAGGAGGAGCTAGCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1R0X3U7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.013

100

0.532


Multiple sequence alignment