Detailed information NTG0966192

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: NYE32_RS09455
• Genome accession: NZ_CP150201
• Coordinates: 2047187..2047579 (-)
• Length: 130 a.a.
• NCBI ID: WP_002885697.1
• Uniprot ID: A0AB33ZFB8
• Organism: Streptococcus sp. FSL R7-0248
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2042187..2052579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE32_RS09415 (NYE32_09415)	dapD	2042257..2042955 (-)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
NYE32_RS09420 (NYE32_09420)	-	2043041..2043793 (-)	753	WP_014635101.1	HAD family hydrolase	-
NYE32_RS09425 (NYE32_09425)	-	2043907..2044746 (-)	840	WP_073686088.1	methyltransferase domain-containing protein	-
NYE32_RS09435 (NYE32_09435)	-	2045168..2045326 (+)	159	WP_014635103.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
NYE32_RS09440 (NYE32_09440)	-	2045346..2045513 (+)	168	WP_002885883.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
NYE32_RS09445 (NYE32_09445)	-	2045561..2045812 (+)	252	WP_014635104.1	hypothetical protein	-
NYE32_RS09450 (NYE32_09450)	tadA	2045899..2046417 (-)	519	WP_014635105.1	tRNA adenosine(34) deaminase TadA	-
NYE32_RS09455 (NYE32_09455)	ssbA	2047187..2047579 (-)	393	WP_002885697.1	single-stranded DNA-binding protein	Machinery gene
NYE32_RS09460 (NYE32_09460)	-	2047808..2048035 (-)	228	WP_003095911.1	sulfurtransferase TusA family protein	-
NYE32_RS09465 (NYE32_09465)	-	2048050..2049081 (-)	1032	WP_139724410.1	YeeE/YedE family protein	-
NYE32_RS09470 (NYE32_09470)	ytpR	2049219..2049842 (-)	624	WP_156685147.1	YtpR family tRNA-binding protein	-
NYE32_RS09475 (NYE32_09475)	-	2049875..2050399 (-)	525	WP_139724408.1	hypothetical protein	-
NYE32_RS09480 (NYE32_09480)	-	2050403..2050717 (-)	315	WP_139724406.1	thioredoxin family protein	-
NYE32_RS09485 (NYE32_09485)	-	2050714..2050998 (-)	285	WP_139724404.1	DUF4651 domain-containing protein	-
NYE32_RS09490 (NYE32_09490)	pepA	2051098..2052165 (+)	1068	WP_139724402.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14759.67 Da
• Isoelectric Point: 5.9275

>NTDB_id=966192 NYE32_RS09455 WP_002885697.1 2047187..2047579(-) (ssbA) [Streptococcus sp. FSL R7-0248]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=966192 NYE32_RS09455 WP_002885697.1 2047187..2047579(-) (ssbA) [Streptococcus sp. FSL R7-0248]
ATGTATAACAAAGTAATTTTAATTGGACGTTTGACAGCCACTCCTGAAATGGTTAAGACTGCTAGCGATAGGTCTTTTAC
ACGTGTCACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCCTCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGCCAAACCCATTACGTTACTGAGGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGACAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.769
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.762
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.746
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	48.113	81.538	0.392
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385