Detailed information NTG0965600

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACKFA7_RS12515
• Genome accession: NZ_CP175553
• Coordinates: 2621025..2622293 (+)
• Length: 422 a.a.
• NCBI ID: WP_038459350.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain 4-9-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2616025..2627293

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKFA7_RS12495 (ACKFA7_12495)	-	2617396..2618016 (-)	621	WP_088461189.1	lipopolysaccharide assembly protein LapB	-
ACKFA7_RS12500 (ACKFA7_12500)	mnmA	2618104..2619219 (-)	1116	WP_038459345.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACKFA7_RS12505 (ACKFA7_12505)	-	2619256..2620395 (-)	1140	WP_038459347.1	cysteine desulfurase family protein	-
ACKFA7_RS12510 (ACKFA7_12510)	cymR	2620414..2620830 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
ACKFA7_RS12515 (ACKFA7_12515)	rarA	2621025..2622293 (+)	1269	WP_038459350.1	replication-associated recombination protein A	Machinery gene
ACKFA7_RS12520 (ACKFA7_12520)	-	2622409..2623173 (-)	765	WP_012118080.1	ThiF family adenylyltransferase	-
ACKFA7_RS12530 (ACKFA7_12530)	aspS	2623499..2625277 (-)	1779	WP_007408199.1	aspartate--tRNA ligase	-
ACKFA7_RS12535 (ACKFA7_12535)	hisS	2625292..2626566 (-)	1275	WP_007612829.1	histidine--tRNA ligase	-
ACKFA7_RS12540 (ACKFA7_12540)	-	2626923..2627093 (-)	171	WP_003152722.1	YrzK family protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46673.61 Da
• Isoelectric Point: 8.8001

>NTDB_id=965600 ACKFA7_RS12515 WP_038459350.1 2621025..2622293(+) (rarA) [Bacillus amyloliquefaciens strain 4-9-2]
MKPLAYRMRPANIEDIIGQEHLVKEDKIIGRMVRAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVIHNKKDME
IVVQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALKR
ALKDEHRGLGSYSVSVDDDAMDHFAQGCGGDVRSALNALELAVLSTKESSDGTVRITRETAEECLQKKSYTHDKNGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESISRRLLVIAYEDIGLASPQAGPRVLSAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAISAVDEALKDIRTGKIGDVPKHLKDAHYKGAQELGRGIGYQYPHDFENGWVEQQYLPDPLKNKQYYKP
KQTGKFEAAIKQVYEKLMKQKK

Nucleotide

• Length: 1269 bp

>NTDB_id=965600 ACKFA7_RS12515 WP_038459350.1 2621025..2622293(+) (rarA) [Bacillus amyloliquefaciens strain 4-9-2]
ATGAAACCACTGGCGTATCGGATGCGGCCTGCCAATATTGAAGACATTATCGGCCAGGAACATTTGGTCAAAGAAGATAA
AATCATCGGCAGAATGGTGCGTGCAAAGCACTTATCATCCATGATCCTGTACGGACCGCCGGGCATCGGAAAAACATCCA
TCGCCACAGCGATCGCAGGATCGACAAGCATCGCATTCAGGAAATTGAATGCCGTCATTCATAATAAAAAAGACATGGAG
ATTGTCGTACAGGAAGCGAAAATGTCAGGCCAGGTCATTTTAATCCTTGACGAAGTGCACAGGCTTGATAAGGGAAAGCA
GGATTTTCTGCTGCCCTATTTAGAAAACGGCATGATTATTTTAATCGGCGCAACGACCGCCAACCCTTATCATGCCATTA
ACCCGGCCATCAGAAGCCGGACCCAGATATTTGAGCTCGAACCGTTAACACCCGATCTGATCAAGCAGGCATTGAAAAGA
GCGCTCAAAGATGAACACCGGGGACTCGGTTCTTACAGCGTTTCGGTGGACGACGACGCGATGGATCATTTCGCACAAGG
GTGCGGGGGAGACGTCCGCTCCGCTTTGAACGCACTGGAGCTTGCCGTGCTCTCCACAAAGGAATCAAGCGACGGCACGG
TCCGGATTACACGGGAAACAGCGGAAGAATGTCTGCAGAAAAAAAGCTATACTCATGATAAAAACGGCGATGCGCATTAT
GACGTCTTATCCGCCTTCCAAAAATCGATCCGAGGCTCGGACGCAAACGCCGCCCTTCATTATCTGGCCCGTCTGATCGA
AGCCGGCGATCTTGAAAGCATATCAAGAAGGCTTCTCGTGATCGCCTATGAAGATATCGGCCTCGCAAGCCCGCAGGCAG
GCCCCCGGGTGCTGAGCGCGATTCAGACCGCAGAACGGATCGGCTTTCCGGAAGCGAGAATTCCGCTGGCCAATGCGGTA
ATCGAATTATGCCTCTCGCCAAAATCAAACTCCGCCATCTCAGCCGTTGATGAGGCGCTCAAAGACATCAGGACGGGTAA
AATCGGCGATGTGCCGAAACATTTAAAAGACGCCCACTATAAAGGGGCCCAAGAGCTCGGACGCGGGATCGGCTATCAAT
ATCCTCACGATTTCGAGAACGGATGGGTCGAACAGCAATATTTGCCCGATCCGTTAAAAAACAAGCAATACTATAAACCG
AAACAAACGGGGAAATTTGAAGCCGCCATAAAGCAAGTGTATGAAAAACTGATGAAGCAGAAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	90.736	99.763	0.905