Detailed information NTG0962077

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WGQ49_RS05630
• Genome accession: NZ_CP149886
• Coordinates: 1082229..1083188 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain NPRC(S) 01.13897
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1077229..1088188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WGQ49_RS05605 (WGQ49_05605)	neuC	1077793..1078908 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
WGQ49_RS05610 (WGQ49_05610)	-	1078905..1079819 (+)	915	Protein_1084	beta-1,4-N-acetylgalactosaminyltransferase	-
WGQ49_RS05615 (WGQ49_05615)	-	1079853..1080515 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
WGQ49_RS05620 (WGQ49_05620)	-	1080510..1081362 (-)	853	Protein_1086	glycosyltransferase	-
WGQ49_RS05625 (WGQ49_05625)	waaV	1081346..1082170 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
WGQ49_RS05630 (WGQ49_05630)	waaF	1082229..1083188 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
WGQ49_RS05635 (WGQ49_05635)	gmhA	1083169..1083729 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
WGQ49_RS05640 (WGQ49_05640)	rfaE1	1083726..1085111 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WGQ49_RS05645 (WGQ49_05645)	rfaD	1085104..1086057 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
WGQ49_RS05650 (WGQ49_05650)	gmhB	1086058..1086618 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WGQ49_RS05655 (WGQ49_05655)	-	1086700..1087002 (+)	303	WP_002852762.1	cytochrome c	-
WGQ49_RS05660 (WGQ49_05660)	ccoS	1087025..1087231 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=962077 WGQ49_RS05630 WP_002875425.1 1082229..1083188(+) (waaF) [Campylobacter jejuni strain NPRC(S) 01.13897]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=962077 WGQ49_RS05630 WP_002875425.1 1082229..1083188(+) (waaF) [Campylobacter jejuni strain NPRC(S) 01.13897]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1