Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   WKW49_RS01050 Genome accession   NZ_CP149819
Coordinates   254842..255237 (+) Length   131 a.a.
NCBI ID   WP_015818072.1    Uniprot ID   -
Organism   Teredinibacter turnerae strain SR02026     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 249842..260237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKW49_RS01025 (WKW49_01025) pilU 250479..251621 (+) 1143 WP_015819970.1 PilT/PilU family type 4a pilus ATPase Machinery gene
  WKW49_RS01030 (WKW49_01030) ruvX 251660..252100 (-) 441 WP_015820484.1 Holliday junction resolvase RuvX -
  WKW49_RS01035 (WKW49_01035) - 252093..252671 (-) 579 WP_015819114.1 YqgE/AlgH family protein -
  WKW49_RS01040 (WKW49_01040) - 252755..253636 (-) 882 WP_041590003.1 energy transducer TonB -
  WKW49_RS01045 (WKW49_01045) gshB 253636..254595 (-) 960 WP_339066943.1 glutathione synthase -
  WKW49_RS01050 (WKW49_01050) pilG 254842..255237 (+) 396 WP_015818072.1 twitching motility response regulator PilG Regulator
  WKW49_RS01055 (WKW49_01055) pilH 255283..255645 (+) 363 WP_015818447.1 twitching motility response regulator PilH -
  WKW49_RS01060 (WKW49_01060) - 255690..256229 (+) 540 WP_015817751.1 chemotaxis protein CheW -
  WKW49_RS01065 (WKW49_01065) - 256389..258590 (+) 2202 WP_015817436.1 methyl-accepting chemotaxis protein -
  WKW49_RS01070 (WKW49_01070) - 258608..259465 (+) 858 WP_015817116.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14359.72 Da        Isoelectric Point: 7.8541

>NTDB_id=961704 WKW49_RS01050 WP_015818072.1 254842..255237(+) (pilG) [Teredinibacter turnerae strain SR02026]
MDVNLEHLKVMVIDDSKTIRRTAETLLQKVGCTVVTATDGFDALAKIADTRPDIIFVDIMMPRLDGYQTCALIKNNSEFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKGELIGAIEAHVKVARAS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=961704 WKW49_RS01050 WP_015818072.1 254842..255237(+) (pilG) [Teredinibacter turnerae strain SR02026]
ATGGACGTTAATCTAGAGCACTTGAAAGTGATGGTTATCGACGACAGTAAAACCATCCGGCGAACAGCGGAAACGCTGTT
GCAAAAAGTCGGTTGTACTGTGGTCACGGCAACGGATGGGTTTGATGCCCTCGCAAAAATTGCCGACACCCGTCCAGACA
TCATTTTTGTCGACATTATGATGCCCCGTCTCGACGGTTATCAAACCTGTGCACTGATCAAAAACAACAGTGAATTCAAA
TCGACACCCGTAATAATGCTTTCCAGTAAAGATGGTCTTTTCGACAAGGCGAAGGGCCGTATTGTGGGTTCAGACCAGTA
CCTGACAAAGCCGTTCAGCAAGGGTGAGCTGATCGGCGCGATCGAAGCCCATGTGAAAGTGGCTCGCGCGAGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

95.42

0.71
  vicR Streptococcus mutans UA159

41.525

90.076

0.374