Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   WG927_RS15470 Genome accession   NZ_CP148896
Coordinates   3120929..3121069 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain XS142     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3115929..3126069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WG927_RS15445 (WG927_15405) - 3116269..3116652 (-) 384 WP_014418761.1 hotdog fold thioesterase -
  WG927_RS15450 (WG927_15410) - 3116674..3117318 (-) 645 Protein_2976 response regulator -
  WG927_RS15455 (WG927_15415) comP 3117399..3119690 (-) 2292 WP_099721970.1 histidine kinase Regulator
  WG927_RS15460 (WG927_15420) comX 3119702..3119866 (-) 165 WP_007613432.1 competence pheromone ComX -
  WG927_RS15465 (WG927_15425) - 3119866..3120777 (-) 912 WP_022553710.1 polyprenyl synthetase family protein -
  WG927_RS15470 (WG927_15430) degQ 3120929..3121069 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  WG927_RS15475 (WG927_15435) - 3121535..3121876 (+) 342 WP_014418765.1 hypothetical protein -
  WG927_RS15480 (WG927_15440) - 3121883..3123106 (-) 1224 WP_029973798.1 EAL and HDOD domain-containing protein -
  WG927_RS15485 (WG927_15445) - 3123236..3124702 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  WG927_RS15490 (WG927_15450) - 3124720..3125271 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  WG927_RS15495 (WG927_15455) - 3125368..3125766 (-) 399 WP_029973800.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=956049 WG927_RS15470 WP_003152043.1 3120929..3121069(-) (degQ) [Bacillus velezensis strain XS142]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=956049 WG927_RS15470 WP_003152043.1 3120929..3121069(-) (degQ) [Bacillus velezensis strain XS142]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891