Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   WHP69_RS06690 Genome accession   NZ_CP148248
Coordinates   1276317..1277501 (-) Length   394 a.a.
NCBI ID   WP_022552397.1    Uniprot ID   A0AA44HKV0
Organism   Campylobacter jejuni strain Z1323CCJ0009     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1271317..1282501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHP69_RS06665 (WHP69_06665) fliL 1272466..1273002 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  WHP69_RS06670 (WHP69_06670) acpS 1273002..1273349 (+) 348 WP_002866684.1 holo-ACP synthase -
  WHP69_RS06675 (WHP69_06675) - 1273350..1273769 (-) 420 WP_002880391.1 hypothetical protein -
  WHP69_RS06680 (WHP69_06680) - 1273766..1275127 (-) 1362 WP_014517093.1 cytochrome P450 -
  WHP69_RS06685 (WHP69_06685) - 1275124..1276245 (-) 1122 WP_070243144.1 DUF829 domain-containing protein -
  WHP69_RS06690 (WHP69_06690) kpsS 1276317..1277501 (-) 1185 WP_022552397.1 capsule polysaccharide modification protein KpsS Regulator
  WHP69_RS06695 (WHP69_06695) kpsC 1277498..1279567 (-) 2070 WP_126232977.1 capsular polysaccharide biosynthesis protein -
  WHP69_RS06700 (WHP69_06700) - 1279631..1281082 (+) 1452 WP_052779865.1 DNA/RNA helicase domain-containing protein -
  WHP69_RS06705 (WHP69_06705) hddC 1281079..1281753 (-) 675 WP_070316834.1 D-glycero-D-manno-heptose 1-phosphate guanosyltransferase -
  WHP69_RS06710 (WHP69_06710) gmhA2 1281741..1282346 (-) 606 WP_070316833.1 D-sedoheptulose 7-phosphate isomerase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46772.53 Da        Isoelectric Point: 9.9368

>NTDB_id=953356 WHP69_RS06690 WP_022552397.1 1276317..1277501(-) (kpsS) [Campylobacter jejuni strain Z1323CCJ0009]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHLLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGVEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPILACNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=953356 WHP69_RS06690 WP_022552397.1 1276317..1277501(-) (kpsS) [Campylobacter jejuni strain Z1323CCJ0009]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGACCTGTGGGAAATTTTTT
TCACCTTCTTGCAATAAAAATGAAAAAAAAACAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAGTTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCCTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCCCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATACAGAAAATATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGTTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAGAAGCTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTATTTTGGCATGTAATTTTAAGA
AATACCTTTTACAAACTAATCAATTCAACGGCAATTTTTACAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

97.208

100

0.972