Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ24_RS05225 | Genome accession | NZ_CP148230 |
| Coordinates | 1006946..1007248 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain Z1323CCJ0031 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1001946..1012248
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ24_RS05200 (WHQ24_05200) | rpsR | 1002309..1002569 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHQ24_RS05205 (WHQ24_05205) | lon | 1002629..1005004 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHQ24_RS05210 (WHQ24_05210) | - | 1005021..1005668 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHQ24_RS05215 (WHQ24_05215) | fliW | 1005829..1006218 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ24_RS05220 (WHQ24_05220) | proC | 1006218..1006949 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ24_RS05225 (WHQ24_05225) | ctsT | 1006946..1007248 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| WHQ24_RS05230 (WHQ24_05230) | - | 1007245..1007907 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| WHQ24_RS05235 (WHQ24_05235) | - | 1007904..1008356 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| WHQ24_RS05240 (WHQ24_05240) | hemD | 1008353..1008982 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| WHQ24_RS05245 (WHQ24_05245) | thiE | 1008960..1009592 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| WHQ24_RS05250 (WHQ24_05250) | thiD | 1009582..1010394 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ24_RS05255 (WHQ24_05255) | - | 1010391..1011077 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| WHQ24_RS05260 (WHQ24_05260) | - | 1011074..1011835 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=953098 WHQ24_RS05225 WP_002855822.1 1006946..1007248(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0031]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=953098 WHQ24_RS05225 WP_002855822.1 1006946..1007248(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0031]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |