Detailed information NTG0943902

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACFIOG_RS08170
• Genome accession: NZ_CP170422
• Coordinates: 1671869..1673143 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102735.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain t7558
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1666869..1678143

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFIOG_RS08140	mnmA	1667071..1668189 (-)	1119	WP_000066105.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACFIOG_RS08145	-	1668190..1669332 (-)	1143	WP_000409167.1	cysteine desulfurase family protein	-
ACFIOG_RS08150	-	1669644..1670657 (+)	1014	WP_000985895.1	LLM class flavin-dependent oxidoreductase	-
ACFIOG_RS08155	-	1670894..1671040 (-)	147	WP_000009238.1	SAS049 family protein	-
ACFIOG_RS08160	-	1671080..1671262 (-)	183	WP_000752909.1	CsbD family protein	-
ACFIOG_RS08165	cymR	1671362..1671784 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
ACFIOG_RS08170	rarA	1671869..1673143 (+)	1275	WP_000102735.1	replication-associated recombination protein A	Machinery gene
ACFIOG_RS08175	-	1673304..1674077 (-)	774	WP_000682646.1	ThiF family adenylyltransferase	-
ACFIOG_RS08180	-	1674077..1674205 (-)	129	WP_001808039.1	hypothetical protein	-
ACFIOG_RS08190	aspS	1674538..1676304 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
ACFIOG_RS08195	hisS	1676320..1677582 (-)	1263	WP_000590824.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47250.81 Da
• Isoelectric Point: 8.3539

>NTDB_id=943902 ACFIOG_RS08170 WP_000102735.1 1671869..1673143(+) (rarA) [Staphylococcus aureus strain t7558]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=943902 ACFIOG_RS08170 WP_000102735.1 1671869..1673143(+) (rarA) [Staphylococcus aureus strain t7558]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGTCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTAAAAAACAAAATTTATTAC
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684