Detailed information NTG0943546

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACFIOE_RS07720
• Genome accession: NZ_CP170411
• Coordinates: 1611949..1613223 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102729.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain t002
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1606949..1618223

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFIOE_RS07690	mnmA	1607151..1608269 (-)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACFIOE_RS07695	-	1608270..1609412 (-)	1143	WP_000409157.1	cysteine desulfurase family protein	-
ACFIOE_RS07700	-	1609724..1610737 (+)	1014	WP_000985878.1	LLM class flavin-dependent oxidoreductase	-
ACFIOE_RS07705	-	1610974..1611120 (-)	147	WP_000009238.1	SAS049 family protein	-
ACFIOE_RS07710	-	1611160..1611342 (-)	183	WP_000752909.1	CsbD family protein	-
ACFIOE_RS07715	cymR	1611442..1611864 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
ACFIOE_RS07720	rarA	1611949..1613223 (+)	1275	WP_000102729.1	replication-associated recombination protein A	Machinery gene
ACFIOE_RS07725	-	1613384..1614157 (-)	774	WP_000682646.1	ThiF family adenylyltransferase	-
ACFIOE_RS07730	-	1614157..1614285 (-)	129	WP_001790559.1	hypothetical protein	-
ACFIOE_RS07740	aspS	1614618..1616384 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
ACFIOE_RS07745	hisS	1616400..1617662 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47222.80 Da
• Isoelectric Point: 8.3526

>NTDB_id=943546 ACFIOE_RS07720 WP_000102729.1 1611949..1613223(+) (rarA) [Staphylococcus aureus strain t002]
MSTEPLASRMRPKNIDEIISQQHLVGPKGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=943546 ACFIOE_RS07720 WP_000102729.1 1611949..1613223(+) (rarA) [Staphylococcus aureus strain t002]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAAAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTGTTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATTGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTTAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGTCAAATTCCAAATCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684