Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | R8922_RS06225 | Genome accession | NZ_AP028390 |
| Coordinates | 1200973..1201926 (+) | Length | 317 a.a. |
| NCBI ID | WP_107701923.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain BCH-11411 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1195973..1206926
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8922_RS06195 (B11411_12400) | neuC | 1196549..1197673 (+) | 1125 | WP_025399082.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| R8922_RS06200 (B11411_12410) | - | 1197666..1198283 (+) | 618 | WP_016818193.1 | glycosyltransferase | - |
| R8922_RS06205 (B11411_12420) | - | 1198280..1198612 (+) | 333 | WP_019260376.1 | hypothetical protein | - |
| R8922_RS06210 (B11411_12430) | - | 1198609..1199274 (+) | 666 | WP_002869017.1 | cytidylyltransferase domain-containing protein | - |
| R8922_RS06215 (B11411_12440) | - | 1199262..1200095 (+) | 834 | WP_002882959.1 | CatB-related O-acetyltransferase | - |
| R8922_RS06220 (B11411_12450) | - | 1200087..1200914 (-) | 828 | WP_052785832.1 | glycosyltransferase family 2 protein | - |
| R8922_RS06225 (B11411_12460) | waaF | 1200973..1201926 (+) | 954 | WP_107701923.1 | glycosyltransferase family 9 protein | Regulator |
| R8922_RS06230 (B11411_12470) | - | 1201933..1202688 (-) | 756 | WP_002869013.1 | glycosyltransferase family 25 protein | - |
| R8922_RS06235 (B11411_12480) | gmhA | 1202688..1203248 (-) | 561 | WP_107701924.1 | D-sedoheptulose 7-phosphate isomerase | - |
| R8922_RS06240 (B11411_12490) | rfaE1 | 1203245..1204630 (-) | 1386 | WP_107701925.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| R8922_RS06245 (B11411_12500) | rfaD | 1204623..1205576 (-) | 954 | WP_052802041.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| R8922_RS06250 (B11411_12510) | gmhB | 1205578..1206139 (-) | 562 | Protein_1213 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| R8922_RS06255 (B11411_12520) | - | 1206220..1206522 (+) | 303 | WP_052785829.1 | c-type cytochrome | - |
| R8922_RS06260 (B11411_12530) | ccoS | 1206546..1206752 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36534.16 Da Isoelectric Point: 10.2875
>NTDB_id=94330 R8922_RS06225 WP_107701923.1 1200973..1201926(+) (waaF) [Campylobacter jejuni strain BCH-11411]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
Nucleotide
Download Length: 954 bp
>NTDB_id=94330 R8922_RS06225 WP_107701923.1 1200973..1201926(+) (waaF) [Campylobacter jejuni strain BCH-11411]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTACAAACAAGCCCTATCCTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTACAAACAAGCCCTATCCTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
92.675 |
99.054 |
0.918 |