Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | V5F93_RS02685 | Genome accession | NZ_CP145035 |
| Coordinates | 521645..522586 (+) | Length | 313 a.a. |
| NCBI ID | WP_047923833.1 | Uniprot ID | A0AAX2TTA8 |
| Organism | Neisseria gonorrhoeae strain WHO_P_2024 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 516645..527586
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V5F93_RS02660 (V5F93_02665) | - | 517146..517655 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| V5F93_RS02665 (V5F93_02670) | - | 517887..518468 (-) | 582 | WP_047923823.1 | superoxide dismutase | - |
| V5F93_RS02670 (V5F93_02675) | dnaB | 518632..520038 (+) | 1407 | WP_047923824.1 | replicative DNA helicase | - |
| V5F93_RS02675 (V5F93_02680) | pilH | 520346..521008 (+) | 663 | WP_047923835.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| V5F93_RS02680 (V5F93_02685) | pilI | 521040..521648 (+) | 609 | WP_047923834.1 | type IV pilus modification protein PilV | Machinery gene |
| V5F93_RS02685 (V5F93_02690) | pilJ | 521645..522586 (+) | 942 | WP_047923833.1 | PilW family protein | Machinery gene |
| V5F93_RS02690 (V5F93_02695) | pilK | 522565..523176 (+) | 612 | WP_047923832.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| V5F93_RS02695 (V5F93_02700) | pilL | 523178..523651 (+) | 474 | WP_012503482.1 | PilX family type IV pilin | Machinery gene |
| V5F93_RS02700 (V5F93_02705) | - | 523721..524029 (-) | 309 | WP_025456241.1 | AzlD family protein | - |
| V5F93_RS02705 (V5F93_02710) | - | 524026..524737 (-) | 712 | Protein_523 | AzlC family ABC transporter permease | - |
| V5F93_RS02710 (V5F93_02715) | dut | 524903..525355 (+) | 453 | WP_003701071.1 | dUTP diphosphatase | - |
| V5F93_RS02715 (V5F93_02720) | dapC | 525427..526614 (+) | 1188 | WP_003701073.1 | succinyldiaminopimelate transaminase | - |
| V5F93_RS02720 (V5F93_02725) | yaaA | 526770..527549 (+) | 780 | WP_003687925.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 313 a.a. Molecular weight: 34415.09 Da Isoelectric Point: 8.7147
>NTDB_id=936210 V5F93_RS02685 WP_047923833.1 521645..522586(+) (pilJ) [Neisseria gonorrhoeae strain WHO_P_2024]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHIGNDVVFNVAQKNALFSLKRNSTNSTNKLIPITESPNINYQNFFQVSSALIFQYGIDDVDASADTTVVSSCAA
ISKPGKQIPTLEDAKKELKIQNSDKEQNGNIARQRHVVNAYAVGKIAGEEGLFRFQLNEKGEWGNPQLLAKKIKRMRVRY
IYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHIGNDVVFNVAQKNALFSLKRNSTNSTNKLIPITESPNINYQNFFQVSSALIFQYGIDDVDASADTTVVSSCAA
ISKPGKQIPTLEDAKKELKIQNSDKEQNGNIARQRHVVNAYAVGKIAGEEGLFRFQLNEKGEWGNPQLLAKKIKRMRVRY
IYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 942 bp
>NTDB_id=936210 V5F93_RS02685 WP_047923833.1 521645..522586(+) (pilJ) [Neisseria gonorrhoeae strain WHO_P_2024]
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATATCGGAAATGATGTTGTTTTCAATGTGGCGCAAAAAAACGCTCTTTTTTCCTTAAAAAG
GAACAGTACAAACAGTACAAATAAACTTATCCCCATAACGGAATCTCCAAATATCAATTATCAGAATTTTTTCCAGGTTA
GTAGCGCATTGATTTTTCAATACGGAATCGATGATGTTGATGCAAGCGCCGATACTACCGTCGTCAGCAGCTGTGCCGCA
ATATCGAAACCGGGTAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCAGAATTCTGATAAGGAGCA
AAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAAGATTGCCGGTGAGGAAGGTTTGTTCC
GCTTCCAATTGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAGAGTGCGGTAT
ATCTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAGCTC
TGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTT
ATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATATCGGAAATGATGTTGTTTTCAATGTGGCGCAAAAAAACGCTCTTTTTTCCTTAAAAAG
GAACAGTACAAACAGTACAAATAAACTTATCCCCATAACGGAATCTCCAAATATCAATTATCAGAATTTTTTCCAGGTTA
GTAGCGCATTGATTTTTCAATACGGAATCGATGATGTTGATGCAAGCGCCGATACTACCGTCGTCAGCAGCTGTGCCGCA
ATATCGAAACCGGGTAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCAGAATTCTGATAAGGAGCA
AAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAAGATTGCCGGTGAGGAAGGTTTGTTCC
GCTTCCAATTGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAGAGTGCGGTAT
ATCTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAGCTC
TGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTT
ATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
98.403 |
100 |
0.984 |