Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   V5G07_RS10500 Genome accession   NZ_CP145015
Coordinates   2000194..2001381 (+) Length   395 a.a.
NCBI ID   WP_106178855.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain WHO_Z_2024     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 1995194..2006381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5G07_RS10485 (V5G07_10515) - 1996114..1996713 (+) 600 WP_003690128.1 DUF4390 domain-containing protein -
  V5G07_RS10490 (V5G07_10520) - 1996713..1998833 (+) 2121 WP_003694352.1 HAMP domain-containing histidine kinase -
  V5G07_RS10495 (V5G07_10525) - 1998826..2000103 (+) 1278 WP_003690124.1 sigma-54 dependent transcriptional regulator -
  V5G07_RS10500 (V5G07_10530) dprA 2000194..2001381 (+) 1188 WP_106178855.1 DNA-processing protein DprA Machinery gene
  V5G07_RS10505 (V5G07_10535) - 2001407..2001868 (+) 462 WP_003690295.1 DUF494 domain-containing protein -
  V5G07_RS10510 (V5G07_10540) topA 2001946..2004252 (+) 2307 WP_014580418.1 type I DNA topoisomerase -
  V5G07_RS10515 (V5G07_10545) - 2004473..2004601 (+) 129 Protein_2039 phosphomethylpyrimidine synthase ThiC -
  V5G07_RS10520 (V5G07_10550) - 2004591..2005135 (+) 545 Protein_2040 IS1595 family transposase -
  V5G07_RS10525 (V5G07_10555) - 2005304..2006068 (+) 765 Protein_2041 opacity family porin -

Sequence


Protein


Download         Length: 395 a.a.        Molecular weight: 41868.96 Da        Isoelectric Point: 6.3096

>NTDB_id=935861 V5G07_RS10500 WP_106178855.1 2000194..2001381(+) (dprA) [Neisseria gonorrhoeae strain WHO_Z_2024]
MTEDERFAWLQLAFTPYIGAESFLLLMRSFGSAQNALSAPAEQVAPAVRHKHALEAWRNAEKRALARQAAEAALEWEMRD
GCRLMLLQDEDFPEMLTQGLIAPPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGRALGGKGIPTVSGMASGIDT
AAHQGALEAEGGTVAVWGTGIDRIYPSANKNLAYEIAEKGLIVSEFPIGTRPYAGNFPRRNRLIAALSQVTLVVEAALES
GSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLTECLDDILNECPGLLQNTGASSYSINKDTPDTGRRAVQT
AYAPPPAAKMPSEGAAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQRIRT

Nucleotide


Download         Length: 1188 bp        

>NTDB_id=935861 V5G07_RS10500 WP_106178855.1 2000194..2001381(+) (dprA) [Neisseria gonorrhoeae strain WHO_Z_2024]
ATGACAGAGGACGAACGTTTCGCGTGGCTGCAATTGGCGTTTACGCCCTATATCGGCGCGGAAAGTTTCCTGCTGCTGAT
GCGCAGTTTCGGCAGCGCGCAAAATGCCTTGTCCGCACCGGCGGAACAGGTTGCCCCGGCGGTGCGGCATAAGCACGCGC
TTGAGGCTTGGCGCAATGCGGAAAAACGCGCTTTGGCGCGGCAGGCGGCAGAAGCGGCGTTGGAATGGGAAATGCGGGAC
GGATGCCGCCTGATGCTGCTTCAGGATGAAGATTTCCCCGAAATGCTGACGCAGGGGCTGATCGCGCCGCCGGTTTTGTT
TTTGCGCGGCAACGTGCGGCTGCTGCACAAGCCTTCCGCCGCCATCGTCGGCAGCCGCCATGCCACGCCGCAGGCGATGC
GGATTGCCAAAGATTTCGGCAGGGCGTTGGGTGGGAAAGGCATTCCTACCGTGTCGGGTATGGCTTCGGGCATCGACACC
GCCGCCCATCAGGGCGCACTGGAGGCAGAAGGCGGCACCGTCGCCGTGTGGGGGACGGGCATAGACCGCATTTATCCGTC
GGCCAACAAAAACCTTGCCTATGAAATCGCCGAAAAAGGGCTGATTGTCAGCGAGTTCCCCATCGGCACGCGGCCGTATG
CCGGCAACTTTCCGCGCCGCAACCGCCTGATTGCCGCGCTGTCGCAGGTTACGCTGGTGGTCGAGGCCGCCTTGGAATCC
GGTTCGCTGATTACCGCCGGCCTGGCGGCAGAAATGGGGCGCGAAGTCATGGCGGTGCCCGGTTCGATAGACAACCCCCA
CAGCAAAGGCTGCCACAAACTGATTAAAGACGGAGCGAAACTGACGGAATGTTTGGACGACATCCTGAACGAATGCCCGG
GGCTATTGCAAAATACGGGTGCTTCGTCATATTCTATAAATAAGGATACGCCCGACACGGGCCGCCGCGCCGTTCAGACG
GCATACGCCCCGCCGCCTGCCGCAAAAATGCCGTCTGAAGGGGCGGCAGGCGGCACAGCCGTCGGCGGCATACTGGATAA
AATGGGTTTCGACCCCATCCATCCCGACGTGCTTGCCGGACAGTTGGCTATGCCTGCCGCAGATTTGTATGCCGCACTGT
TGGAATTGGAATTGGACGGCAGCGTTGCCGCAATGCCCGGCGGCAGATACCAGCGTATCCGAACTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Neisseria gonorrhoeae strain FA1090

99.241

100

0.992

  dprA Neisseria gonorrhoeae MS11

98.987

100

0.99

  dprA Neisseria meningitidis strain C311

89.421

100

0.899

  dprA Neisseria meningitidis MC58

89.421

100

0.899

  dprA Vibrio cholerae strain A1552

37.531

100

0.377