Detailed information NTG0935305

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: V5G20_RS19000
• Genome accession: NZ_CP144922
• Coordinates: 3936903..3939164 (-)
• Length: 753 a.a.
• NCBI ID: WP_024984957.1
• Uniprot ID: -
• Organism: Brevibacillus borstelensis strain CP19
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3931903..3944164

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5G20_RS18970 (V5G20_18970)	-	3932519..3933583 (-)	1065	WP_003387540.1	AI-2E family transporter	-
V5G20_RS18975 (V5G20_18975)	-	3933977..3934663 (+)	687	WP_003387542.1	TerC family protein	-
V5G20_RS18980 (V5G20_18980)	-	3934747..3935604 (-)	858	WP_122958167.1	MurR/RpiR family transcriptional regulator	-
V5G20_RS18985 (V5G20_18985)	-	3935886..3936071 (-)	186	WP_003387544.1	hypothetical protein	-
V5G20_RS18990 (V5G20_18990)	-	3936099..3936305 (-)	207	WP_003387545.1	hypothetical protein	-
V5G20_RS18995 (V5G20_18995)	-	3936342..3936824 (-)	483	WP_003387546.1	PRC-barrel domain-containing protein	-
V5G20_RS19000 (V5G20_19000)	recD2	3936903..3939164 (-)	2262	WP_024984957.1	ATP-dependent RecD-like DNA helicase	Machinery gene
V5G20_RS19005 (V5G20_19005)	-	3939593..3939763 (+)	171	WP_338461791.1	hypothetical protein	-
V5G20_RS19010 (V5G20_19010)	-	3939875..3941017 (-)	1143	WP_024983958.1	cysteine desulfurase family protein	-
V5G20_RS19015 (V5G20_19015)	-	3941030..3941449 (-)	420	WP_003387550.1	Rrf2 family transcriptional regulator	-
V5G20_RS19020 (V5G20_19020)	-	3941557..3941730 (+)	174	WP_170208318.1	hypothetical protein	-
V5G20_RS19025 (V5G20_19025)	-	3941772..3943109 (-)	1338	WP_024983959.1	AAA family ATPase	-
V5G20_RS19030 (V5G20_19030)	-	3943116..3943871 (-)	756	WP_003387554.1	tRNA threonylcarbamoyladenosine dehydratase	-

Sequence

Protein

• Length: 753 a.a.
• Molecular weight: 85038.20 Da
• Isoelectric Point: 5.1617

>NTDB_id=935305 V5G20_RS19000 WP_024984957.1 3936903..3939164(-) (recD2) [Brevibacillus borstelensis strain CP19]
MMSQETLPLFAEPFVRGYVEQEIFYNEETWYGVIRLKVEETSEAIKENDVVVVGNFPRPHPEELYTFYGEWKTHPRFGQQ
FAASRYERETPKTVAGVEKYLASGLFQGIGKKMAKRIVEHLGVDALSIIADRPESLAEVPGISEARAKQIYESVMEHRSL
EQAMVFLYEFGIGVQLALRIYQTYKLETLKVLSEEPYRLIEDVQGIGFKRADEIARSTGIAASSEERVQAAAIFTLQEAS
YAEGHVFLPIEELCEKTLRLLHECGGHAFTPEEVRLAIEALFVASKVMWDEERVYLPSLFFAEVGLAKRLRFFADRDDFA
SFPVSELYQAMGAVEEELDITYAQTQRDAIEQAITSGLMLLTGGPGTGKTTVIRGICRVFAHLHGISFDLKKYDESNPFP
ILLAAPTGRAAKRMAETTGLPAMTLHRLLGWKGDSFEHDAEHQIRGKLLIVDEMSMVDIWLANQLFRALPSDMQIIMVGD
PDQLPSVGPGNVLQDMIRSGLLPRVQLTEIYRQAEESSIIRLAHDVRKGIVPSDLLDSSPDRRFFTSSPQDVNEAVKQIC
SGAVKKGYTAKDVQVLAPMYKGNAGVNRLNEELQELFNPKTGQKREVTFGDTVFRTGDKVLQLVNNAEEHVFNGDMGEIV
AIFYPNENAENEEMIVVSFDGREVMYKRSAYHQLTLAYCCSVHKSQGSEFPIVVMPFVKNYHRMLRRKLVYTGITRSKSF
LIMCGEPEAFRIAVQTDEEGVRYSYLEERLKQG

Nucleotide

• Length: 2262 bp

>NTDB_id=935305 V5G20_RS19000 WP_024984957.1 3936903..3939164(-) (recD2) [Brevibacillus borstelensis strain CP19]
ATGATGTCGCAGGAAACACTCCCTTTGTTTGCTGAACCATTCGTTCGCGGCTATGTGGAACAAGAAATTTTTTACAATGA
AGAAACGTGGTATGGAGTTATTCGTCTTAAAGTAGAGGAGACCTCGGAAGCGATCAAGGAGAATGACGTCGTTGTCGTGG
GAAACTTCCCCCGTCCTCATCCGGAAGAGCTGTACACATTTTACGGAGAATGGAAAACACACCCCCGGTTTGGGCAGCAA
TTCGCGGCTTCCCGTTATGAGCGCGAAACGCCGAAAACGGTGGCTGGCGTAGAAAAGTATCTGGCCAGTGGCCTGTTCCA
GGGAATTGGCAAAAAGATGGCCAAACGAATCGTAGAGCATCTGGGAGTCGACGCGTTGTCGATTATCGCTGACCGTCCCG
AGTCGTTGGCGGAGGTGCCTGGGATATCGGAAGCACGTGCCAAGCAGATTTATGAATCGGTGATGGAACATCGTTCTTTG
GAACAGGCTATGGTGTTTTTGTACGAGTTCGGGATCGGAGTGCAGCTCGCATTGCGCATCTACCAGACATACAAGCTGGA
GACCTTGAAGGTGCTTTCGGAGGAGCCGTACCGGCTGATCGAGGATGTGCAGGGGATCGGTTTCAAACGTGCGGACGAGA
TCGCTCGTTCAACCGGGATCGCGGCATCCTCGGAGGAGCGGGTCCAGGCAGCAGCTATTTTTACGCTGCAGGAAGCTTCT
TATGCCGAAGGCCACGTTTTTCTCCCGATCGAAGAGCTGTGTGAAAAAACGCTGCGCTTGCTTCATGAGTGCGGCGGACA
TGCCTTTACGCCGGAAGAGGTCAGACTGGCGATTGAAGCGCTGTTTGTCGCCTCCAAAGTGATGTGGGACGAGGAGCGGG
TTTACTTGCCAAGCCTCTTTTTTGCCGAGGTCGGCTTGGCCAAGCGGCTTCGTTTTTTTGCCGACCGCGATGACTTTGCT
TCCTTTCCGGTGTCTGAGCTGTACCAGGCCATGGGTGCAGTCGAAGAAGAGCTGGATATTACGTATGCACAGACGCAGCG
GGATGCGATCGAACAGGCGATCACTTCTGGCTTGATGCTGCTGACAGGTGGGCCGGGTACAGGGAAGACTACTGTCATCC
GGGGGATATGTCGTGTATTTGCACATCTGCATGGAATTTCCTTCGATCTGAAAAAATATGACGAAAGCAATCCTTTTCCC
ATCCTGCTGGCCGCGCCTACGGGCAGAGCGGCAAAGAGAATGGCGGAGACGACCGGGCTGCCCGCCATGACGCTTCACCG
GCTGCTTGGCTGGAAAGGCGACAGCTTTGAACATGATGCCGAACACCAGATCCGTGGAAAGCTGTTGATCGTAGATGAGA
TGTCGATGGTGGACATTTGGCTTGCGAATCAATTGTTCAGAGCGCTGCCAAGCGACATGCAAATCATCATGGTTGGCGAT
CCGGACCAGCTTCCGTCTGTCGGCCCGGGGAACGTTTTGCAGGACATGATTCGTTCCGGGCTATTGCCGCGCGTACAGCT
TACGGAGATTTATCGGCAAGCGGAAGAATCGTCGATTATTCGCCTCGCCCATGATGTGCGGAAAGGAATTGTCCCGTCCG
ATCTGCTGGATTCCTCCCCTGATCGCAGATTTTTCACAAGTTCGCCACAAGATGTAAACGAAGCTGTGAAACAAATTTGC
TCGGGAGCCGTAAAGAAAGGATATACAGCAAAAGATGTACAAGTCCTCGCGCCCATGTACAAAGGAAATGCGGGTGTAAA
CCGGTTGAATGAAGAGCTCCAGGAGCTGTTTAATCCAAAGACCGGCCAAAAACGGGAAGTGACGTTTGGCGACACCGTAT
TTCGGACGGGGGACAAAGTGCTTCAACTTGTAAACAACGCCGAAGAACACGTGTTCAACGGTGATATGGGTGAGATTGTC
GCCATTTTTTACCCAAATGAAAACGCAGAGAATGAAGAAATGATCGTCGTCTCCTTTGATGGCCGTGAAGTGATGTACAA
GCGGTCTGCATACCATCAGCTGACGCTGGCCTACTGCTGCTCCGTTCATAAGTCGCAAGGCAGCGAGTTTCCAATCGTCG
TCATGCCATTTGTAAAAAATTACCACAGGATGCTGCGACGGAAGCTGGTGTATACAGGAATAACGCGCAGTAAATCATTT
CTCATCATGTGTGGAGAGCCGGAAGCGTTTCGTATCGCCGTCCAGACAGACGAAGAGGGCGTACGATACAGCTACCTGGA
GGAACGCCTGAAACAAGGATGA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (107-153)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• AAA domain (AAA_30) (342-536)

• Helix-hairpin-helix containing domain (HHH_RecD2) (156-247)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (677-723)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.267	99.602	0.501