Detailed information NTG0934463

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: V4942_RS09655
• Genome accession: NZ_CP144687
• Coordinates: 1776470..1777474 (-)
• Length: 334 a.a.
• NCBI ID: WP_011174226.1
• Uniprot ID: Q72GH5
• Organism: Thermus thermophilus strain TTHB27_delta_cmr4
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1771470..1782474

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V4942_RS09620 (V4942_09620)	hisG	1771942..1772562 (+)	621	WP_011174220.1	ATP phosphoribosyltransferase	-
V4942_RS09625 (V4942_09625)	trmH	1772559..1773143 (+)	585	WP_011174221.1	tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	-
V4942_RS09630 (V4942_09630)	-	1773133..1773372 (-)	240	WP_008630920.1	hypothetical protein	-
V4942_RS09635 (V4942_09635)	-	1773374..1773562 (-)	189	WP_011174222.1	hypothetical protein	-
V4942_RS09640 (V4942_09640)	-	1773552..1774508 (-)	957	WP_011174223.1	branched-chain amino acid transaminase	-
V4942_RS09645 (V4942_09645)	-	1774495..1775448 (-)	954	WP_011174224.1	hydrogen peroxide-inducible genes activator	-
V4942_RS09650 (V4942_09650)	-	1775558..1776466 (+)	909	WP_011174225.1	manganese catalase family protein	-
V4942_RS09655 (V4942_09655)	dprA	1776470..1777474 (-)	1005	WP_011174226.1	DNA-processing protein DprA	Machinery gene
V4942_RS09660 (V4942_09660)	era	1777559..1778464 (+)	906	WP_008630929.1	GTPase Era	-
V4942_RS09665 (V4942_09665)	-	1778509..1779396 (+)	888	WP_011174227.1	acyltransferase	-
V4942_RS09675 (V4942_09675)	-	1779592..1780770 (-)	1179	WP_011174228.1	site-specific integrase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36235.18 Da
• Isoelectric Point: 6.8891

>NTDB_id=934463 V4942_RS09655 WP_011174226.1 1776470..1777474(-) (dprA) [Thermus thermophilus strain TTHB27_delta_cmr4]
MDPLALALLPGIGPKRLLEVLKAEDPLGFLRERFPEAWRHLPEAEAQAERERRRAEALGVRLLGLWEEGFPEGLKALPQP
PTHLYLKGELPPEREAVALVGTRRASPWALAFARKLARELSEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDR
VYPPENRPLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGLCRAVVVVEAPLDSGALITARHALELGKEVLAVPGRPMDER
SLGANRLIQDGAYPVLSAEDVLSYLGMSARPKPLPGLSPEEEALYALLQEKKEALPEALAMALGIPPERVLSLLTLLELK
GLARALPGGRYGPG

Nucleotide

• Length: 1005 bp

>NTDB_id=934463 V4942_RS09655 WP_011174226.1 1776470..1777474(-) (dprA) [Thermus thermophilus strain TTHB27_delta_cmr4]
GTGGACCCCTTGGCCCTCGCCCTCCTCCCGGGCATCGGCCCCAAGCGGCTTTTGGAGGTCCTAAAGGCGGAGGACCCTCT
GGGCTTCCTGCGGGAGCGCTTCCCCGAGGCCTGGCGGCACCTCCCCGAGGCCGAGGCCCAGGCGGAAAGGGAGAGGCGGC
GCGCCGAGGCCCTAGGGGTGCGCCTCCTGGGTCTCTGGGAGGAGGGCTTCCCCGAGGGGCTGAAGGCGCTTCCCCAGCCG
CCCACCCACCTCTACCTGAAGGGGGAGCTTCCCCCGGAAAGGGAGGCGGTGGCCCTCGTGGGCACGCGCCGGGCCTCCCC
TTGGGCCCTGGCCTTTGCCCGGAAGCTCGCCCGGGAGCTTTCCGAGGCCGGGCTCTGGGTGGTCTCGGGCCTCGCCCGGG
GCATAGACCGGGAGGCCCACCTCGGGGCCCTCGAGGCCGGGGGGCGCACCCTGGGCGTCTTGGGAAGCGCCCTGGACCGG
GTCTACCCCCCGGAAAACCGCCCTTTGGCCCAACGGATGGACCTCCTCTCCGAGTTCCCCTTCGGCACCGGGCCCAAGCC
CGAGTTCTTTCCCCGGCGGAACCGCCTCATCGCCGGGCTTTGCCGGGCGGTGGTCGTGGTGGAGGCCCCCCTGGACTCCG
GGGCCCTCATCACCGCCCGCCACGCCCTGGAGCTCGGCAAGGAGGTGCTGGCCGTGCCCGGAAGGCCCATGGACGAGCGT
TCTCTGGGAGCCAACCGCCTCATCCAGGACGGGGCCTACCCGGTGCTCTCCGCCGAGGATGTCCTCTCCTATCTGGGAAT
GTCCGCAAGGCCCAAGCCCCTCCCGGGCCTCTCCCCGGAGGAGGAGGCCCTTTACGCCCTCCTGCAGGAAAAGAAGGAGG
CGCTCCCCGAGGCCCTGGCCATGGCCCTGGGGATCCCCCCGGAGCGGGTGCTCTCCCTTCTCACCCTTTTGGAGCTAAAG
GGCCTGGCCCGGGCCCTCCCGGGAGGGCGCTACGGGCCAGGCTAA

Domains

Predicted by InterProScan.

• DNA recombination-mediator protein A (DNA_processg_A) (56-255)

• DprA winged helix domain (DprA_WH) (269-329)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Thermus thermophilus HB27	100	100	1
dprA	Vibrio campbellii strain DS40M4	38.547	100	0.413
dprA	Vibrio cholerae strain A1552	37.255	100	0.398
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	45.392	87.725	0.398