Detailed information NTG0933474

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: V3C92_RS09280
• Genome accession: NZ_CP144302
• Coordinates: 2040568..2041674 (-)
• Length: 368 a.a.
• NCBI ID: WP_016198325.1
• Uniprot ID: -
• Organism: Elizabethkingia meningoseptica strain EM1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2035568..2046674

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V3C92_RS09255 (V3C92_09255)	-	2036723..2037439 (+)	717	WP_016198330.1	DNA alkylation repair protein	-
V3C92_RS09260 (V3C92_09260)	-	2037436..2037819 (-)	384	WP_016198329.1	group III truncated hemoglobin	-
V3C92_RS09265 (V3C92_09265)	-	2038024..2038515 (+)	492	WP_016198328.1	YkgJ family cysteine cluster protein	-
V3C92_RS09270 (V3C92_09270)	-	2038640..2038921 (+)	282	WP_016198327.1	hypothetical protein	-
V3C92_RS09275 (V3C92_09275)	gdhA	2039017..2040381 (-)	1365	WP_016198326.1	NADP-specific glutamate dehydrogenase	-
V3C92_RS09280 (V3C92_09280)	dprA	2040568..2041674 (-)	1107	WP_016198325.1	DNA-processing protein DprA	Machinery gene
V3C92_RS09285 (V3C92_09285)	-	2041709..2042479 (-)	771	WP_016198324.1	rhomboid family intramembrane serine protease	-
V3C92_RS09290 (V3C92_09290)	-	2042637..2043758 (+)	1122	WP_034881321.1	DUF3078 domain-containing protein	-
V3C92_RS09295 (V3C92_09295)	-	2043764..2045296 (-)	1533	Protein_1818	YifB family Mg chelatase-like AAA ATPase	-
V3C92_RS09300 (V3C92_09300)	-	2045555..2045890 (+)	336	WP_231941698.1	winged helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40725.51 Da
• Isoelectric Point: 6.3919

>NTDB_id=933474 V3C92_RS09280 WP_016198325.1 2040568..2041674(-) (dprA) [Elizabethkingia meningoseptica strain EM1]
MFSEETLYAIALRHCLLIGDFYFKKLISAAGSAKDAWLLSKKELKKQYGIGDKISGEIGKDTYLLFAEKELQFCLQNNIK
ILLSHRKELPGLLNECDDAPAILYQKGTFSDNTNISIVGTRKTSRYGKEFIADFLHQLKDNHIQTISGLALGADTHVHEE
SLKNNIPTTAVLAHGFQTIYPSANKNLAEKILENGGCLFTEFNSSQDPIRESFIQRNRIIAGISPTTIITETAYGGGSVS
TANFANLYNREVLALPGPIDYKYSQGCNLLISQNKARIISSVPEAIEYLGLSAEKTEQLSLFDSQEVLKGLTPEQALVLT
TITNSSPINPDEISEKTALPVYRILPVILDLELLGYIRATSGRQYRPT

Nucleotide

• Length: 1107 bp

>NTDB_id=933474 V3C92_RS09280 WP_016198325.1 2040568..2041674(-) (dprA) [Elizabethkingia meningoseptica strain EM1]
ATGTTTTCTGAAGAAACACTTTATGCCATCGCTTTAAGACACTGCCTTTTAATTGGTGATTTTTATTTCAAAAAACTGAT
CTCTGCTGCCGGTTCGGCAAAAGACGCATGGTTGCTATCCAAAAAAGAACTCAAAAAACAATATGGTATCGGAGACAAAA
TCTCAGGGGAAATCGGAAAAGATACTTATTTACTGTTCGCTGAAAAAGAACTGCAATTCTGCCTGCAGAATAATATCAAA
ATATTATTATCACACCGGAAAGAACTCCCGGGACTGCTTAATGAATGTGATGATGCTCCGGCTATTCTTTATCAAAAAGG
TACTTTTAGCGATAACACCAATATTAGTATTGTGGGAACCAGAAAAACATCACGCTACGGAAAAGAATTTATTGCTGATT
TCCTTCATCAGCTGAAAGACAATCATATTCAGACAATTAGTGGTCTTGCATTGGGAGCAGATACCCACGTACATGAAGAA
TCTTTAAAAAACAACATTCCTACAACGGCTGTACTGGCACATGGATTCCAGACTATTTATCCTTCAGCAAATAAAAATCT
GGCAGAGAAAATACTGGAAAACGGAGGCTGCCTCTTCACAGAATTCAATTCATCTCAGGATCCCATCCGCGAAAGTTTTA
TTCAAAGAAACAGGATTATTGCCGGAATATCACCTACAACCATTATCACCGAAACAGCTTATGGCGGAGGTTCGGTAAGT
ACTGCTAATTTTGCTAACCTATACAATCGTGAGGTTTTAGCCCTCCCCGGCCCTATTGATTATAAATACAGTCAGGGTTG
TAATCTGCTGATTTCACAAAATAAAGCCCGGATTATTTCTTCTGTTCCGGAGGCTATTGAATATTTGGGGCTTTCTGCAG
AAAAAACGGAACAATTGTCTCTTTTTGATTCGCAGGAAGTTCTTAAAGGCCTCACTCCCGAACAGGCCCTTGTCCTTACA
ACAATTACCAACTCTTCACCTATAAATCCGGATGAAATTTCCGAAAAAACAGCTTTGCCTGTTTATCGAATTTTACCGGT
TATTCTCGACCTTGAGCTTTTAGGATACATCAGGGCTACTTCCGGGAGACAATATCGCCCGACATAA

Domains

Predicted by InterProScan.

• DprA winged helix domain (DprA_WH) (309-362)

• DNA recombination-mediator protein A (DNA_processg_A) (76-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	56.044	98.913	0.554