Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   AB5J49_RS27295 Genome accession   NZ_CP163439
Coordinates   6101616..6102740 (-) Length   374 a.a.
NCBI ID   WP_369171392.1    Uniprot ID   -
Organism   Streptomyces sp. R28     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6096616..6107740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB5J49_RS27275 (AB5J49_27275) - 6097579..6099162 (+) 1584 WP_369171387.1 sensor histidine kinase -
  AB5J49_RS27280 (AB5J49_27280) - 6099159..6099815 (+) 657 WP_369171388.1 response regulator -
  AB5J49_RS27285 (AB5J49_27285) - 6099838..6100467 (-) 630 WP_369171389.1 phosphatase PAP2 family protein -
  AB5J49_RS27290 (AB5J49_27290) - 6100667..6101491 (+) 825 WP_369171391.1 hypothetical protein -
  AB5J49_RS27295 (AB5J49_27295) disA 6101616..6102740 (-) 1125 WP_369171392.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  AB5J49_RS27300 (AB5J49_27300) radA/sms 6102821..6104230 (-) 1410 WP_369171393.1 DNA repair protein RadA Machinery gene
  AB5J49_RS27305 (AB5J49_27305) - 6104413..6106209 (+) 1797 WP_369171395.1 hypothetical protein -
  AB5J49_RS27310 (AB5J49_27310) - 6106260..6107132 (-) 873 WP_369171397.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40100.82 Da        Isoelectric Point: 4.9201

>NTDB_id=925273 AB5J49_RS27295 WP_369171392.1 6101616..6102740(-) (disA) [Streptomyces sp. R28]
MAANDRGAAPGKSGGSAGSDGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGFDKTVETMCTGGFVLDVEFAATRLR
ELCKLDGGIVLSSDLSKILRAGVQFVPDATIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELDALTHAELLELTTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=925273 AB5J49_RS27295 WP_369171392.1 6101616..6102740(-) (disA) [Streptomyces sp. R28]
GTGGCAGCCAACGACCGGGGAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCGGTGGCTCCCGGCACGGCGCTGCGCGACGGACTGGAGCGAGTGCTCCGCGGCAACACCGGCGGGCTCATCGTGC
TCGGCTTCGACAAGACCGTCGAGACGATGTGTACGGGCGGATTCGTCCTGGATGTCGAGTTCGCGGCGACGCGACTGCGG
GAGCTCTGCAAGCTCGACGGCGGCATCGTGCTGTCGTCCGACCTGTCGAAGATCCTGCGGGCGGGCGTGCAGTTCGTGCC
CGACGCGACGATCCCGACGGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGG
TGGTGTCGGTCTCCCAGTCGATGCGGCTCATCGCGCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCCAACCAGGCGCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGAACGTTGTC
AGCACTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCTCCGCGGTCGCCCAGCGACTGGAGATGGTCCGCCGTATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACGGACGGCCGCCTTCTGGCGCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCCGAGCGCGAGCTCGTGGTGCGCGACTACGTCCCCGAGCCGACGGCCAAGCGTTCCCGCACGGTCGACGA
GGCGCTGTACGAGCTGGACGCCCTCACCCACGCCGAGCTCCTCGAACTCACCACCGTGGCAAGGGCGTTGGGCTACACGG
GATCCCCGGAGGCGCTGGACTCTGCGGTCTCCCCGCGCGGCTTCCGCCTCCTGGCCAAGGTGCCGAGGCTGCCCGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTGCAGACCGTGGA
CGGCGTGGGCGAGGCCCGGGCGCGCAGCGTGCGGGAGGGGCTGTCGCGGCTGGCGGAGAGCTCGATCCTGGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

Helix-hairpin-helix motif (HHH_2)

(324-359)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.821

92.513

0.433