Detailed information NTG0920592

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: VPN06_RS01300
• Genome accession: NZ_CP141950
• Coordinates: 248473..249588 (+)
• Length: 371 a.a.
• NCBI ID: WP_324682589.1
• Uniprot ID: -
• Organism: Bibersteinia trehalosi strain M01
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 243473..254588

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VPN06_RS01265	xerD	243860..244753 (+)	894	WP_015433555.1	site-specific tyrosine recombinase XerD	-
VPN06_RS01270	-	244756..245061 (+)	306	WP_015433557.1	DUF5389 family protein	-
VPN06_RS01275	-	245136..245681 (+)	546	WP_324682583.1	DsbE family thiol:disulfide interchange protein	-
VPN06_RS01280	-	245683..246144 (+)	462	WP_038443040.1	cytochrome c-type biogenesis protein CcmH	-
VPN06_RS01285	ccmI	246146..247039 (+)	894	WP_025266677.1	c-type cytochrome biogenesis protein CcmI	-
VPN06_RS01290	crp	247125..247799 (+)	675	WP_025266676.1	cAMP-activated global transcriptional regulator CRP	-
VPN06_RS01295	def	247840..248352 (-)	513	WP_015433562.1	peptide deformylase	-
VPN06_RS01300	dprA	248473..249588 (+)	1116	WP_324682589.1	DNA-processing protein DprA	Machinery gene
VPN06_RS01305	fumC	249701..251095 (+)	1395	WP_015433564.1	class II fumarate hydratase	-
VPN06_RS01310	pdxH	251145..251777 (-)	633	WP_324682593.1	pyridoxamine 5'-phosphate oxidase	-
VPN06_RS01315	selA	251835..253214 (-)	1380	WP_324682595.1	L-seryl-tRNA(Sec) selenium transferase	-
VPN06_RS01325	gntR	253394..254392 (+)	999	WP_324682597.1	gluconate operon transcriptional repressor GntR	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 41453.73 Da
• Isoelectric Point: 6.4252

>NTDB_id=920592 VPN06_RS01300 WP_324682589.1 248473..249588(+) (dprA) [Bibersteinia trehalosi strain M01]
MLEKLLTLLQIPQLGAQKINRLLTEIDFATFCQFDKTQLRQIGWNEKQIQRWFHPEQRWQEDALRWAEHADCHILTLFDE
NYPFLLKQIATAPPILFVHGNIESLSLPQIAIVGSRNYSHYGEYWAGHFSAELVKHHFAITSGLAIGIDGFCHQRTIDEG
GITIAVLGSGLNCLYPARHRKLAEKIVETGGALVSEFFPKQPPLAENFPRRNRIISGLSLGTLVVEAALNSGSLITARYA
LEQGREVFAIPNTLQNPYAAGCHKLIKDGAILVDNIQDILEAITWQYQPQQGELFELETKQALQKPQNFAKNIPELTACQ
AAIFAQITLNPISADDLAKAVKLDIASVLVELLNLELLGIIKQTTGGYTRI

Nucleotide

• Length: 1116 bp

>NTDB_id=920592 VPN06_RS01300 WP_324682589.1 248473..249588(+) (dprA) [Bibersteinia trehalosi strain M01]
ATGCTCGAAAAACTTTTAACGTTATTACAAATCCCCCAGCTTGGCGCGCAAAAAATCAATCGCTTACTCACGGAAATCGA
TTTTGCCACCTTCTGCCAATTTGATAAAACGCAACTGCGCCAAATAGGCTGGAATGAAAAACAAATCCAACGCTGGTTTC
ACCCAGAACAACGTTGGCAGGAAGATGCATTACGCTGGGCAGAGCATGCCGATTGCCATATTTTAACGTTATTTGATGAA
AATTATCCTTTCTTACTAAAACAGATTGCAACTGCACCACCCATCTTATTCGTACACGGTAACATTGAAAGCCTCTCTTT
GCCACAAATTGCCATTGTTGGCAGCCGTAATTACTCACATTACGGCGAATATTGGGCTGGGCATTTTTCTGCGGAATTAG
TCAAACATCATTTTGCAATAACCAGCGGCTTAGCTATTGGGATTGATGGCTTCTGCCATCAACGAACAATTGATGAAGGC
GGCATAACCATCGCGGTATTAGGTTCTGGTTTAAATTGCCTATACCCTGCACGTCATCGCAAGCTTGCTGAAAAAATTGT
TGAAACAGGCGGAGCTCTAGTTTCAGAGTTTTTTCCAAAACAGCCGCCTCTTGCTGAAAACTTTCCGCGCCGCAACCGTA
TTATCAGTGGCTTATCGCTCGGTACATTAGTAGTAGAAGCGGCTTTAAATAGTGGCTCACTTATCACTGCACGCTATGCA
CTCGAACAAGGACGAGAGGTCTTCGCCATTCCCAATACCCTCCAAAACCCCTATGCCGCAGGTTGCCATAAATTGATTAA
AGACGGTGCAATACTTGTCGATAACATACAAGATATTTTAGAAGCGATCACTTGGCAATACCAACCACAACAAGGCGAAT
TATTTGAACTAGAAACCAAACAAGCGCTACAAAAACCACAAAATTTTGCAAAAAATATCCCCGAATTGACCGCTTGCCAA
GCCGCTATTTTTGCCCAAATAACACTCAACCCAATTAGCGCTGATGATTTAGCCAAAGCGGTAAAATTAGACATTGCGAG
CGTTTTGGTGGAATTACTTAATTTAGAATTGCTCGGCATTATTAAACAAACCACTGGAGGCTATACGAGAATATGA

Domains

Predicted by InterProScan.

• DprA winged helix domain (DprA_WH) (310-367)

• DNA recombination-mediator protein A (DNA_processg_A) (67-274)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	72.703	99.73	0.725
dprA	Haemophilus influenzae Rd KW20	50.448	90.296	0.456
dprA	Vibrio campbellii strain DS40M4	46.175	98.652	0.456
dprA	Vibrio cholerae strain A1552	41.645	100	0.423
dprA	Legionella pneumophila strain ERS1305867	39.362	100	0.399