Detailed information NTG0918233

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: VNN26_RS05015
• Genome accession: NZ_CP141690
• Coordinates: 1009386..1010321 (+)
• Length: 311 a.a.
• NCBI ID: WP_019292241.1
• Uniprot ID: A0AAJ2IZ38
• Organism: Lactococcus petauri strain R22-11 BR-C
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1004386..1015321

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN26_RS04985 (VNN26_04985)	-	1004818..1005264 (+)	447	WP_003133306.1	Dps family protein	-
VNN26_RS04990 (VNN26_04990)	-	1005303..1005683 (-)	381	WP_019292245.1	rhodanese-like domain-containing protein	-
VNN26_RS04995 (VNN26_04995)	-	1005703..1006668 (-)	966	WP_061414320.1	ROK family glucokinase	-
VNN26_RS05000 (VNN26_05000)	-	1006661..1006873 (-)	213	WP_003133311.1	YqgQ family protein	-
VNN26_RS05005 (VNN26_05005)	typA	1007194..1009035 (+)	1842	WP_206888029.1	translational GTPase TypA	-
VNN26_RS05010 (VNN26_05010)	-	1009110..1009340 (+)	231	WP_019292242.1	DUF3165 family protein	-
VNN26_RS05015 (VNN26_05015)	comYH	1009386..1010321 (+)	936	WP_019292241.1	class I SAM-dependent methyltransferase	Machinery gene
VNN26_RS05020 (VNN26_05020)	-	1010406..1011599 (+)	1194	WP_019294232.1	acetate kinase	-
VNN26_RS05025 (VNN26_05025)	-	1011718..1012911 (+)	1194	WP_165720166.1	acetate kinase	-
VNN26_RS05030 (VNN26_05030)	pyrH	1013002..1013718 (+)	717	WP_019292238.1	UMP kinase	-
VNN26_RS05035 (VNN26_05035)	frr	1013747..1014304 (+)	558	WP_017368646.1	ribosome recycling factor	-
VNN26_RS05040 (VNN26_05040)	-	1014415..1015275 (+)	861	WP_206888026.1	S1 RNA-binding domain-containing protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35095.12 Da
• Isoelectric Point: 4.6120

>NTDB_id=918233 VNN26_RS05015 WP_019292241.1 1009386..1010321(+) (comYH) [Lactococcus petauri strain R22-11 BR-C]
MDIEKIEKAFGLVLENIMAIQAELLTDFYDAFVEQNAAYLGALEFASLTKENNDKVRSMNLTKSEWQKLFQFVLLQGSRV
APMQANHNLTPDSIGFIFNFIIEELHKERKIRLLEFGSGTGNLAETLLVHMQKEVDYVGFEVDDLLLDLSASMSEVMGTE
ASFLQIDAVKPQPLEPVDVVMSDLPVGYYPDDETASHFQVHDKSEHTYVHHLMVEQSFKYLKESGFALFLAPDNLLTSAQ
SEFLKAWIKEHAHVAAVITLPSSLFKGAGKSIYLLSKNQTNTPTFVYPLSDLADRSILQEFMSEFVKNVKI

Nucleotide

• Length: 936 bp

>NTDB_id=918233 VNN26_RS05015 WP_019292241.1 1009386..1010321(+) (comYH) [Lactococcus petauri strain R22-11 BR-C]
ATGGATATAGAGAAAATCGAAAAAGCCTTTGGATTAGTTCTTGAGAATATTATGGCAATTCAAGCAGAGCTCTTGACGGA
TTTTTATGATGCTTTTGTGGAACAAAATGCAGCTTACTTAGGCGCTTTAGAATTTGCGTCACTGACGAAGGAAAATAATG
ATAAGGTTCGTTCAATGAACCTCACGAAAAGTGAATGGCAAAAGCTGTTTCAGTTTGTTTTGCTTCAGGGGTCACGTGTC
GCACCAATGCAGGCAAATCATAATTTAACTCCGGATTCTATTGGTTTCATCTTTAATTTTATCATTGAGGAGTTACACAA
AGAAAGAAAGATTCGTTTACTAGAATTTGGCTCAGGAACGGGGAATTTGGCGGAAACGCTTTTGGTTCACATGCAAAAAG
AAGTAGACTATGTTGGTTTTGAAGTAGATGACCTCTTGTTGGATTTGTCCGCTTCAATGTCAGAAGTCATGGGAACAGAA
GCAAGTTTTCTCCAAATCGATGCCGTTAAACCACAGCCCTTGGAACCTGTGGATGTTGTGATGAGTGATCTCCCAGTTGG
TTATTATCCAGACGATGAAACAGCCAGCCATTTTCAAGTGCATGACAAATCAGAACATACCTATGTGCACCATTTAATGG
TTGAGCAATCTTTCAAATATCTGAAAGAGAGTGGTTTTGCGCTCTTCTTAGCTCCAGATAATCTTTTGACAAGTGCACAG
TCTGAGTTTTTGAAGGCTTGGATTAAAGAGCATGCGCATGTTGCTGCAGTTATTACATTACCTTCATCACTCTTTAAAGG
TGCAGGGAAATCAATTTATTTATTAAGTAAAAACCAGACAAATACACCGACTTTTGTTTACCCCTTGTCTGATTTAGCAG
ACCGTTCTATTTTGCAAGAATTTATGTCTGAGTTTGTGAAAAATGTTAAGATTTGA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (173-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	49.677	99.678	0.495
comYH	Streptococcus mutans UA159	49.355	99.678	0.492