Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   AB1F75_RS20625 Genome accession   NZ_CP160396
Coordinates   4001410..4002237 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis subsp. subtilis strain BSP1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 3996410..4007237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F75_RS20600 (AB1F75_20600) abrB 3998756..3999046 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  AB1F75_RS20605 (AB1F75_20605) rsmI 3999095..3999973 (-) 879 WP_015253012.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  AB1F75_RS20610 (AB1F75_20610) yazA 3999948..4000247 (-) 300 WP_015253013.1 GIY-YIG nuclease family protein -
  AB1F75_RS20615 (AB1F75_20615) trmNF 4000234..4000977 (-) 744 WP_015253014.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  AB1F75_RS20620 (AB1F75_20620) yabA 4001036..4001395 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  AB1F75_RS20625 (AB1F75_20625) yaaT 4001410..4002237 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  AB1F75_RS20630 (AB1F75_20630) holB 4002240..4003229 (-) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  AB1F75_RS20635 (AB1F75_20635) yaaR 4003241..4003681 (-) 441 WP_009966249.1 YaaR family protein -
  AB1F75_RS20640 (AB1F75_20640) darA 4003694..4004023 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  AB1F75_RS20645 (AB1F75_20645) tmk 4004097..4004735 (-) 639 WP_015253015.1 dTMP kinase -
  AB1F75_RS20650 (AB1F75_20650) efpO 4004732..4006174 (-) 1443 Protein_4022 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=918233 AB1F75_RS20625 WP_003226767.1 4001410..4002237(-) (yaaT) [Bacillus subtilis subsp. subtilis strain BSP1]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=918233 AB1F75_RS20625 WP_003226767.1 4001410..4002237(-) (yaaT) [Bacillus subtilis subsp. subtilis strain BSP1]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTCCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996