Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   SD437_RS07415 Genome accession   NZ_CP139565
Coordinates   1423559..1424155 (+) Length   198 a.a.
NCBI ID   WP_014417618.1    Uniprot ID   I2C4E7
Organism   Bacillus velezensis strain NCCP     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1418559..1429155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD437_RS07385 - 1418773..1419228 (+) 456 WP_014417614.1 flavodoxin -
  SD437_RS07390 dapD 1419310..1420020 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  SD437_RS07395 - 1420091..1421215 (+) 1125 WP_345913697.1 N-acetyldiaminopimelate deacetylase -
  SD437_RS07400 - 1421276..1421521 (+) 246 WP_003154596.1 YkuS family protein -
  SD437_RS07405 - 1421555..1422361 (-) 807 WP_025649509.1 mechanosensitive ion channel family protein -
  SD437_RS07410 - 1422649..1423107 (+) 459 WP_014417617.1 TlpA disulfide reductase family protein -
  SD437_RS07415 rok 1423559..1424155 (+) 597 WP_014417618.1 transcriptional regulator Rok Regulator
  SD437_RS07420 - 1424176..1425168 (-) 993 WP_106067852.1 sporulation protein -
  SD437_RS07425 - 1425314..1425916 (+) 603 WP_257989135.1 molybdenum cofactor guanylyltransferase -
  SD437_RS07430 - 1425968..1426987 (+) 1020 WP_110085530.1 molybdopterin-synthase adenylyltransferase MoeB -
  SD437_RS07435 glp 1427005..1428297 (+) 1293 WP_014417621.1 gephyrin-like molybdotransferase Glp -
  SD437_RS07440 mobB 1428258..1428779 (+) 522 WP_224443618.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22529.56 Da        Isoelectric Point: 9.6909

>NTDB_id=910211 SD437_RS07415 WP_014417618.1 1423559..1424155(+) (rok) [Bacillus velezensis strain NCCP]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQTQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=910211 SD437_RS07415 WP_014417618.1 1423559..1424155(+) (rok) [Bacillus velezensis strain NCCP]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCGGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGACTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCGGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATATCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C4E7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843