Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | SIB44_RS19410 | Genome accession | NZ_CP138986 |
| Coordinates | 4186945..4187979 (-) | Length | 344 a.a. |
| NCBI ID | WP_058091364.1 | Uniprot ID | - |
| Organism | Marinobacter sp. MIT1392 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4181945..4192979
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SIB44_RS19395 | - | 4183684..4184037 (+) | 354 | WP_058091372.1 | hypothetical protein | - |
| SIB44_RS19400 | - | 4184077..4185450 (-) | 1374 | WP_082888495.1 | OmpP1/FadL family transporter | - |
| SIB44_RS19405 | pilU | 4185608..4186729 (-) | 1122 | WP_058091365.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| SIB44_RS19410 | pilT | 4186945..4187979 (-) | 1035 | WP_058091364.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| SIB44_RS19415 | - | 4188032..4188745 (+) | 714 | WP_058091363.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| SIB44_RS19420 | proC | 4188809..4189642 (+) | 834 | WP_058091362.1 | pyrroline-5-carboxylate reductase | - |
| SIB44_RS19425 | - | 4189665..4190249 (+) | 585 | WP_058091361.1 | YggT family protein | - |
| SIB44_RS19430 | - | 4190456..4192420 (+) | 1965 | WP_058091360.1 | dynamin family protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38146.88 Da Isoelectric Point: 6.2443
>NTDB_id=906537 SIB44_RS19410 WP_058091364.1 4186945..4187979(-) (pilT) [Marinobacter sp. MIT1392]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQVFKDISSVPRGLVLVTGPTGSGKSTTLAAMMDYINDTRYEHILTIED
PIEFVHDSKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCL
ERLLQKGLISREAARAKAKMPDNF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQVFKDISSVPRGLVLVTGPTGSGKSTTLAAMMDYINDTRYEHILTIED
PIEFVHDSKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCL
ERLLQKGLISREAARAKAKMPDNF
Nucleotide
Download Length: 1035 bp
>NTDB_id=906537 SIB44_RS19410 WP_058091364.1 4186945..4187979(-) (pilT) [Marinobacter sp. MIT1392]
ATGGATATTACTGAACTGCTTGCCTTTTCGGCGAAACAGGGCGCATCGGATTTGCACCTGTCAGCCGGTCTGCCCCCCAT
GATCCGTGTCGACGGCGACGTGCGCCGCATCAACCTGCCCCCGATGGAGCACAAAGAAGTGCACGGGTTGATCTACGACA
TCATGAACGACAAGCAGCGTAAGGATTACGAAGAGTTCCTGGAAACCGACTTCTCGTTCGAGGTGCCGGGTGTGGCCCGT
TTCCGGGTAAACGCCTTCAACCAGAACCGTGGCGCCGGCGCTGTATTCCGGACCATCCCTTCGAAGGTTCTGACCATGGA
AGATCTGGGCATGGGCCAGGTGTTCAAGGATATTTCGTCCGTACCCCGTGGCCTGGTGCTGGTTACCGGGCCCACCGGCT
CCGGTAAGTCCACCACTCTGGCGGCGATGATGGACTATATCAACGACACCCGCTATGAACATATCCTGACCATCGAAGAC
CCGATCGAATTCGTGCACGATTCGAAAAAGTGCCTGGTCAACCAGCGGGAAGTGCACCGGGACACCCTGGGCTTCAACGA
GGCTTTGCGCTCCGCCCTGCGGGAAGACCCGGACATCATCCTGGTAGGTGAGCTACGGGACCTGGAAACCATCCGCCTGG
CCCTGACCGCCGCCGAAACCGGCCACCTGGTGTTCGGCACCCTGCACACCACCTCCGCCGCCAAGACCATCGACCGTGTG
GTGGACGTGTTCCCAGCTGAGGAGAAGTCCATGGTTCGGTCGATGCTGTCCGAATCCTTGCAGGCGGTTATCTCCCAGAC
CCTGATGAAGAAAATGGGCGGCGGCCGGATTGCCGCCCACGAAATCATGATTGGCACCTCGGCCATCCGTAACCTGATCC
GGGAAGACAAGATCGCCCAGATGTACTCGTCGATCCAGACCGGCGGTTCCCTGGGCATGCAGACGCTGGATCAATGCCTG
GAGCGCCTGCTGCAGAAGGGTCTTATTTCCCGTGAAGCGGCACGGGCCAAGGCCAAGATGCCTGATAACTTTTAA
ATGGATATTACTGAACTGCTTGCCTTTTCGGCGAAACAGGGCGCATCGGATTTGCACCTGTCAGCCGGTCTGCCCCCCAT
GATCCGTGTCGACGGCGACGTGCGCCGCATCAACCTGCCCCCGATGGAGCACAAAGAAGTGCACGGGTTGATCTACGACA
TCATGAACGACAAGCAGCGTAAGGATTACGAAGAGTTCCTGGAAACCGACTTCTCGTTCGAGGTGCCGGGTGTGGCCCGT
TTCCGGGTAAACGCCTTCAACCAGAACCGTGGCGCCGGCGCTGTATTCCGGACCATCCCTTCGAAGGTTCTGACCATGGA
AGATCTGGGCATGGGCCAGGTGTTCAAGGATATTTCGTCCGTACCCCGTGGCCTGGTGCTGGTTACCGGGCCCACCGGCT
CCGGTAAGTCCACCACTCTGGCGGCGATGATGGACTATATCAACGACACCCGCTATGAACATATCCTGACCATCGAAGAC
CCGATCGAATTCGTGCACGATTCGAAAAAGTGCCTGGTCAACCAGCGGGAAGTGCACCGGGACACCCTGGGCTTCAACGA
GGCTTTGCGCTCCGCCCTGCGGGAAGACCCGGACATCATCCTGGTAGGTGAGCTACGGGACCTGGAAACCATCCGCCTGG
CCCTGACCGCCGCCGAAACCGGCCACCTGGTGTTCGGCACCCTGCACACCACCTCCGCCGCCAAGACCATCGACCGTGTG
GTGGACGTGTTCCCAGCTGAGGAGAAGTCCATGGTTCGGTCGATGCTGTCCGAATCCTTGCAGGCGGTTATCTCCCAGAC
CCTGATGAAGAAAATGGGCGGCGGCCGGATTGCCGCCCACGAAATCATGATTGGCACCTCGGCCATCCGTAACCTGATCC
GGGAAGACAAGATCGCCCAGATGTACTCGTCGATCCAGACCGGCGGTTCCCTGGGCATGCAGACGCTGGATCAATGCCTG
GAGCGCCTGCTGCAGAAGGGTCTTATTTCCCGTGAAGCGGCACGGGCCAAGGCCAAGATGCCTGATAACTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
90.116 |
100 |
0.901 |
| pilT | Pseudomonas stutzeri DSM 10701 |
90.116 |
100 |
0.901 |
| pilT | Acinetobacter nosocomialis M2 |
83.43 |
100 |
0.834 |
| pilT | Acinetobacter baumannii D1279779 |
83.43 |
100 |
0.834 |
| pilT | Acinetobacter baumannii strain A118 |
83.43 |
100 |
0.834 |
| pilT | Acinetobacter baylyi ADP1 |
81.977 |
100 |
0.82 |
| pilT | Legionella pneumophila strain Lp02 |
77.219 |
98.256 |
0.759 |
| pilT | Legionella pneumophila strain ERS1305867 |
77.219 |
98.256 |
0.759 |
| pilT | Neisseria gonorrhoeae MS11 |
68.235 |
98.837 |
0.674 |
| pilT | Neisseria meningitidis 8013 |
68.235 |
98.837 |
0.674 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.471 |
98.837 |
0.657 |
| pilT | Vibrio cholerae strain A1552 |
66.471 |
98.837 |
0.657 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.304 |
100 |
0.515 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.194 |
97.384 |
0.401 |
| pilU | Acinetobacter baylyi ADP1 |
39.017 |
100 |
0.392 |
| pilU | Vibrio cholerae strain A1552 |
39.701 |
97.384 |
0.387 |