Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   SD459_RS05840 Genome accession   NZ_CP138627
Coordinates   1127413..1127604 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain AYGS-17     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1122413..1132604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD459_RS05810 (SD459_05805) argF 1123265..1124236 (+) 972 WP_017417442.1 ornithine carbamoyltransferase -
  SD459_RS05815 (SD459_05810) - 1124311..1124490 (+) 180 WP_003155070.1 YjzC family protein -
  SD459_RS05820 (SD459_05815) - 1124527..1124712 (-) 186 WP_007409129.1 YjzD family protein -
  SD459_RS05825 (SD459_05820) - 1124973..1125707 (+) 735 WP_014417405.1 hypothetical protein -
  SD459_RS05830 (SD459_05825) - 1125790..1126356 (+) 567 WP_025649580.1 hypothetical protein -
  SD459_RS05835 (SD459_05830) med 1126447..1127400 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  SD459_RS05840 (SD459_05835) comZ 1127413..1127604 (+) 192 WP_003155061.1 ComZ family protein Regulator
  SD459_RS05845 (SD459_05840) - 1127633..1127851 (-) 219 WP_007409123.1 hypothetical protein -
  SD459_RS05850 (SD459_05845) - 1128019..1128957 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  SD459_RS05855 (SD459_05850) fabF 1128980..1130218 (+) 1239 WP_025649581.1 beta-ketoacyl-ACP synthase II -
  SD459_RS05860 (SD459_05855) - 1130302..1131087 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  SD459_RS05865 (SD459_05860) - 1131261..1132247 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=903726 SD459_RS05840 WP_003155061.1 1127413..1127604(+) (comZ) [Bacillus velezensis strain AYGS-17]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=903726 SD459_RS05840 WP_003155061.1 1127413..1127604(+) (comZ) [Bacillus velezensis strain AYGS-17]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794