Detailed information NTG0899464

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: R6U77_RS17365
• Genome accession: NZ_CP137624
• Coordinates: 3474212..3476593 (-)
• Length: 793 a.a.
• NCBI ID: WP_319838393.1
• Uniprot ID: -
• Organism: Lysinibacillus louembei strain Ll15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3469212..3481593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R6U77_RS17340 (R6U77_17340)	-	3469247..3469762 (-)	516	WP_293920947.1	DUF1292 domain-containing protein	-
R6U77_RS17345 (R6U77_17345)	-	3469834..3470124 (-)	291	WP_293920948.1	DUF1292 domain-containing protein	-
R6U77_RS17350 (R6U77_17350)	ruvX	3470444..3470860 (-)	417	WP_293920950.1	Holliday junction resolvase RuvX	-
R6U77_RS17355 (R6U77_17355)	-	3470857..3471129 (-)	273	WP_107838770.1	IreB family regulatory phosphoprotein	-
R6U77_RS17360 (R6U77_17360)	alaS	3471213..3473873 (-)	2661	WP_319836601.1	alanine--tRNA ligase	-
R6U77_RS17365 (R6U77_17365)	recD2	3474212..3476593 (-)	2382	WP_319838393.1	ATP-dependent RecD-like DNA helicase	Machinery gene
R6U77_RS17370 (R6U77_17370)	hisA	3476758..3477531 (+)	774	WP_319836602.1	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	-
R6U77_RS17375 (R6U77_17375)	-	3477537..3477827 (+)	291	WP_319836603.1	hypothetical protein	-
R6U77_RS17380 (R6U77_17380)	-	3477874..3478401 (-)	528	WP_293920954.1	TraR/DksA C4-type zinc finger protein	-
R6U77_RS17385 (R6U77_17385)	-	3478454..3479113 (-)	660	WP_293920955.1	lipopolysaccharide assembly protein LapB	-
R6U77_RS17390 (R6U77_17390)	mnmA	3479124..3480245 (-)	1122	WP_319836604.1	tRNA 2-thiouridine(34) synthase MnmA	-
R6U77_RS17395 (R6U77_17395)	-	3480289..3481434 (-)	1146	WP_319836605.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 793 a.a.
• Molecular weight: 88440.73 Da
• Isoelectric Point: 4.9406

>NTDB_id=899464 R6U77_RS17365 WP_319838393.1 3474212..3476593(-) (recD2) [Lysinibacillus louembei strain Ll15]
MEKRFILGRPIVSIFHNATNMYSIIRVKIQETNLAYEEKEMIVVGYFPPLTEDELYRFTGNMKTHPKYGVQFQIDTFEKE
VPATEQGVIHYLSSDLFTGIGRKTAETIVEKLGVDALKKIMDDPHALDVIPRLSQEKKQMIMEVIEQNLGLERVMIQLNE
WGFGPQLGMKIYQTYREDTVTLLKENPYRLIEEVEGIGFGRADDLGAKLGITGNHPDRIKAAIFHVLTVAALSDGHVYLE
AEQVLPTVKSMLEQSQRVEIPFDAISQACIEMREENKICGEETRMYLPSLYFSEVGIASKILELVENNKKQSHFSKDEIL
KAIGELEERYEVQYAPSQVAAIECALQNAVMILTGGPGTGKTTVVKGLVEVYAELHGLSLDPKTYAKKEEPFPIILAAPT
GRAAKRLAESTGLPAMTIHRLLGFTGQEKEEETEREITGRLVIIDEMSMVDTWLAHQLLKSLAKDVQVIFVGDQDQLPPV
GPGQVLKDLLASKQVPTVELTDVYRQAEGSTIIEVAHQIKRGTVPPTLTQKTADRSFIQASTEQIANVVTQIVKSATAKG
QAIRDIQVLAPMYKGPAGIDALNKQIQELVNPNDGTRKELAFGDTVYRIGDKVLQLVNQPDSNVFNGDMGEVVAIIRAKE
TVEKQDLLVVSYDGIEVTYQRGDLNQITLAYCCSIHKSQGSEFQTVIMPIVRGYSKMLRRNLLYTGITRAKSFLILCGEP
DVLAQGLMKTDDLQRFTSLTARLNPMDEEEITEVTEMKREGATSMPSVLNVETAPYIHPLIGMEGVSPFDFKD

Nucleotide

• Length: 2382 bp

>NTDB_id=899464 R6U77_RS17365 WP_319838393.1 3474212..3476593(-) (recD2) [Lysinibacillus louembei strain Ll15]
ATGGAAAAGCGCTTTATACTAGGGCGCCCAATTGTTTCTATTTTTCATAACGCAACGAATATGTATTCAATTATACGTGT
GAAAATTCAAGAAACAAATTTAGCCTATGAAGAGAAGGAAATGATTGTTGTTGGCTATTTTCCACCATTGACAGAGGATG
AGCTGTATCGATTTACCGGCAATATGAAGACACATCCAAAATATGGTGTGCAATTTCAAATCGATACGTTTGAAAAGGAA
GTGCCTGCGACAGAGCAAGGGGTCATTCATTATTTATCGAGCGATTTATTTACAGGAATTGGTCGCAAAACAGCGGAAAC
CATTGTGGAAAAGCTTGGTGTTGATGCGTTAAAAAAAATTATGGATGATCCGCATGCCCTTGATGTGATTCCGCGATTAT
CGCAAGAAAAAAAGCAGATGATTATGGAAGTGATTGAACAAAATTTAGGCTTAGAGCGCGTCATGATTCAACTAAATGAA
TGGGGCTTCGGACCTCAGCTCGGCATGAAAATTTACCAAACATATCGTGAAGATACGGTTACCTTATTAAAGGAAAATCC
GTATCGTTTAATTGAAGAAGTAGAAGGGATTGGCTTTGGACGTGCGGATGATTTAGGTGCAAAGCTCGGTATTACAGGCA
ATCACCCTGATCGAATTAAGGCGGCTATTTTTCATGTTTTAACAGTTGCAGCATTGTCGGATGGGCATGTTTACTTAGAG
GCGGAGCAGGTATTACCGACAGTAAAATCGATGCTAGAGCAAAGCCAACGTGTGGAAATCCCGTTTGATGCGATTTCACA
GGCCTGTATTGAAATGCGTGAAGAAAACAAAATTTGTGGTGAGGAAACACGCATGTATTTACCTTCACTTTATTTTAGTG
AGGTCGGTATTGCGTCCAAAATTTTAGAGCTTGTCGAGAATAACAAAAAGCAATCGCATTTTTCAAAGGATGAGATTTTA
AAGGCAATTGGAGAGCTAGAGGAGCGTTATGAGGTGCAGTATGCGCCATCCCAAGTTGCAGCAATTGAATGTGCGCTGCA
AAATGCAGTGATGATTTTAACAGGTGGCCCTGGTACAGGGAAAACAACGGTTGTCAAAGGGCTTGTGGAAGTATATGCAG
AGCTACATGGTTTGTCGCTTGATCCGAAAACATATGCCAAAAAAGAAGAGCCATTTCCGATTATATTAGCTGCACCGACA
GGACGTGCAGCGAAGCGATTAGCGGAATCAACGGGCTTGCCTGCAATGACGATCCACCGTTTACTAGGCTTTACTGGGCA
GGAAAAAGAGGAAGAAACAGAGCGTGAAATAACAGGTCGGCTTGTTATTATTGATGAAATGTCGATGGTGGATACATGGC
TCGCGCATCAGCTATTAAAAAGCTTAGCAAAGGATGTACAGGTGATTTTCGTAGGTGATCAAGACCAGCTGCCACCTGTT
GGACCAGGGCAAGTGTTGAAGGATTTGCTTGCATCAAAGCAAGTGCCAACAGTGGAGTTGACAGACGTTTATAGACAAGC
AGAAGGCTCGACAATTATTGAGGTTGCCCATCAAATTAAGCGTGGTACAGTGCCGCCTACATTGACACAAAAAACAGCTG
ACCGCTCCTTTATTCAAGCATCGACAGAGCAAATTGCTAACGTCGTGACACAAATTGTTAAAAGTGCGACAGCGAAAGGG
CAGGCGATACGCGATATTCAAGTGCTTGCACCGATGTATAAAGGACCCGCAGGCATTGACGCATTAAATAAACAAATTCA
AGAGCTCGTCAATCCAAATGATGGTACACGTAAGGAGCTTGCCTTTGGTGATACCGTTTATCGCATTGGTGATAAAGTGC
TTCAGCTTGTGAATCAGCCTGACAGCAATGTTTTTAATGGCGATATGGGCGAGGTTGTGGCAATTATTCGTGCAAAGGAA
ACGGTGGAAAAGCAAGACTTACTCGTTGTATCCTATGACGGTATTGAAGTGACGTATCAGCGTGGTGATTTGAACCAAAT
AACGCTAGCCTATTGCTGCTCCATTCATAAATCGCAAGGCTCGGAGTTTCAAACGGTAATTATGCCGATTGTGCGCGGCT
ATTCAAAAATGCTACGTCGCAACTTGCTGTACACAGGCATTACACGTGCGAAAAGCTTTTTAATTTTGTGCGGTGAGCCA
GATGTACTTGCACAAGGCTTAATGAAAACCGATGATTTGCAGCGCTTCACAAGCTTAACAGCACGCTTAAACCCGATGGA
TGAAGAAGAAATAACTGAAGTAACAGAAATGAAACGAGAGGGTGCAACATCAATGCCATCTGTTTTAAATGTGGAAACCG
CTCCGTATATTCATCCATTGATTGGCATGGAAGGCGTGTCGCCATTTGATTTTAAAGATTGA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (582-642)

• Helix-hairpin-helix containing domain (HHH_RecD2) (150-238)

• AAA domain (AAA_30) (334-541)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (670-717)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	53.711	100	0.538