Detailed information NTG0896905

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ABC799_RS01520
• Genome accession: NZ_CP155534
• Coordinates: 279595..280494 (+)
• Length: 299 a.a.
• NCBI ID: WP_000904833.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain DCC1476
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 274595..285494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC799_RS01490 (ABC799_01490)	-	274765..275059 (+)	295	Protein_264	hypothetical protein	-
ABC799_RS01495 (ABC799_01495)	-	275215..276429 (+)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
ABC799_RS01500 (ABC799_01500)	rpmH	276574..276708 (+)	135	WP_000831905.1	50S ribosomal protein L34	-
ABC799_RS01505 (ABC799_01505)	-	276992..277885 (+)	894	Protein_267	cell wall surface anchor protein	-
ABC799_RS01510 (ABC799_01510)	-	278190..278963 (+)	774	WP_000575638.1	TatD family hydrolase	-
ABC799_RS01515 (ABC799_01515)	rnmV	278963..279523 (+)	561	WP_000664448.1	ribonuclease M5	-
ABC799_RS01520 (ABC799_01520)	comR	279595..280494 (+)	900	WP_000904833.1	helix-turn-helix transcriptional regulator	Regulator
ABC799_RS01525 (ABC799_01525)	-	280814..281110 (+)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
ABC799_RS01530 (ABC799_01530)	-	281187..283217 (+)	2031	WP_000825257.1	bacteriocin-associated integral membrane family protein	-
ABC799_RS01535 (ABC799_01535)	-	283219..283860 (+)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
ABC799_RS01540 (ABC799_01540)	-	283853..284161 (+)	309	WP_000333257.1	hypothetical protein	-
ABC799_RS01545 (ABC799_01545)	rsmA	284292..285164 (+)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35335.16 Da
• Isoelectric Point: 4.8989

>NTDB_id=896905 ABC799_RS01520 WP_000904833.1 279595..280494(+) (comR) [Streptococcus pneumoniae strain DCC1476]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=896905 ABC799_RS01520 WP_000904833.1 279595..280494(+) (comR) [Streptococcus pneumoniae strain DCC1476]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361