Detailed information NTG0896699

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: ABC810_RS05230
• Genome accession: NZ_CP155532
• Coordinates: 1018190..1018738 (+)
• Length: 182 a.a.
• NCBI ID: WP_231844676.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain SP264
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1013190..1023738

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC810_RS05195 (ABC810_05185)	-	1014227..1014838 (+)	612	WP_000251935.1	V-type ATP synthase subunit D	-
ABC810_RS05200 (ABC810_05190)	-	1015111..1015296 (+)	186	WP_001136124.1	hypothetical protein	-
ABC810_RS05205 (ABC810_05195)	tnpB	1015334..1015600 (+)	267	WP_001248801.1	IS66 family insertion sequence element accessory protein TnpB	-
ABC810_RS05210 (ABC810_05200)	-	1015755..1016063 (-)	309	Protein_983	transposase	-
ABC810_RS05215 (ABC810_05205)	-	1016045..1016482 (+)	438	Protein_984	IS66 family transposase	-
ABC810_RS05220 (ABC810_05210)	-	1016589..1017247 (+)	659	Protein_985	IS66 family transposase	-
ABC810_RS05225 (ABC810_05215)	-	1017340..1018143 (+)	804	Protein_986	IS5 family transposase	-
ABC810_RS05230 (ABC810_05220)	comA/nlmT	1018190..1018738 (+)	549	WP_231844676.1	ATP-binding cassette domain-containing protein	Regulator
ABC810_RS05235 (ABC810_05225)	-	1018751..1018921 (+)	171	WP_000711939.1	hypothetical protein	-
ABC810_RS05240 (ABC810_05230)	gdhA	1019427..1020773 (-)	1347	WP_000199560.1	NADP-specific glutamate dehydrogenase	-
ABC810_RS05245 (ABC810_05235)	-	1021110..1021861 (+)	752	Protein_990	transposase	-
ABC810_RS05250 (ABC810_05240)	-	1021858..1022076 (+)	219	WP_000028150.1	hypothetical protein	-
ABC810_RS05255 (ABC810_05245)	-	1022133..1022375 (-)	243	WP_000710764.1	type B 50S ribosomal protein L31	-
ABC810_RS05260 (ABC810_05250)	-	1022471..1023406 (-)	936	WP_000401779.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	-

Sequence

Protein

• Length: 182 a.a.
• Molecular weight: 20319.54 Da
• Isoelectric Point: 7.8656

>NTDB_id=896699 ABC810_RS05230 WP_231844676.1 1018190..1018738(+) (comA/nlmT) [Streptococcus pneumoniae strain SP264]
MDTGKVLFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKHEVTSQKIEEVCKAVQIYDEIMAMPMKFNTIISE
MGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEERITKYIQSQGCTQIIVAHRLSTIKDADVIFVMKGGKIVE
SGNHKYLITLGGEYYSLYTKRK

Nucleotide

• Length: 549 bp

>NTDB_id=896699 ABC810_RS05230 WP_231844676.1 1018190..1018738(+) (comA/nlmT) [Streptococcus pneumoniae strain SP264]
ATTGATACAGGAAAAGTTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAATATTAAGTCAAAATTTAGGAGT
AGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAATATAACTTTAAAGCACGAAGTTACTTCACAAAAGA
TAGAGGAAGTTTGTAAAGCAGTTCAAATCTATGATGAAATCATGGCTATGCCGATGAAATTTAATACTATCATCTCAGAG
ATGGGGTCAAATATTTCAGGTGGGCAAAGGCAACGGATAGCACTGGCACGTGCATTAATAAATAATCCTAGTATTGTAAT
TTTAGATGAAGCAACTAGTGCATTAGACACTATTAATGAGGAAAGAATAACAAAGTATATACAAAGTCAGGGCTGTACTC
AAATAATTGTAGCTCATAGATTGTCAACGATTAAGGATGCGGATGTTATTTTTGTAATGAAAGGTGGTAAGATTGTTGAG
TCAGGAAATCATAAGTACTTAATAACTCTTGGTGGAGAGTACTACAGCTTATATACAAAAAGGAAATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (2-113)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	42.778	98.901	0.423
comA	Streptococcus gordonii str. Challis substr. CH1	43.258	97.802	0.423
comA	Streptococcus mitis NCTC 12261	43.182	96.703	0.418
comA	Streptococcus mitis SK321	42.614	96.703	0.412
comA	Streptococcus pneumoniae R6	42.045	96.703	0.407
comA	Streptococcus pneumoniae Rx1	42.045	96.703	0.407
comA	Streptococcus pneumoniae D39	42.045	96.703	0.407
comA	Streptococcus pneumoniae TIGR4	40.909	96.703	0.396
rcrQ	Streptococcus mutans UA159	35.676	100	0.363