NTDB

Overview

Name	rcrP	Type	Regulator
Locus tag	R4706_RS07020	Genome accession	NZ_CP137111
Coordinates	1384882..1385703 (+)	Length	273 a.a.
NCBI ID	WP_000601678.1	Uniprot ID	A0A6I3U1Q8
Organism	Streptococcus pneumoniae strain 17023
Function	regulate competence (predicted from homology) Competence regulation

Genomic Context

Location: 1379882..1390703

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4706_RS06995	-	1380234..1380842 (+)	609	WP_000083610.1	hypothetical protein	-
R4706_RS07000	-	1380835..1381245 (+)	411	WP_000595758.1	hypothetical protein	-
R4706_RS07005	ply	1381256..1382671 (+)	1416	WP_001284361.1	cholesterol-dependent cytolysin pneumolysin	-
R4706_RS07010	-	1383554..1384270 (+)	717	WP_000532876.1	YebC/PmpR family DNA-binding transcriptional regulator	-
R4706_RS07015	-	1384394..1384865 (+)	472	Protein_1357	MarR family winged helix-turn-helix transcriptional regulator	-
R4706_RS07020	rcrP	1384882..1385703 (+)	822	WP_000601678.1	ABC transporter permease	Regulator
R4706_RS07025	-	1385896..1386741 (+)	846	Protein_1359	ATP-binding cassette domain-containing protein	-
R4706_RS07030	-	1386807..1387169 (+)	363	WP_000078804.1	DUF2200 domain-containing protein	-
R4706_RS07035	-	1387166..1387669 (+)	504	WP_000800942.1	phosphatase PAP2 family protein	-
R4706_RS07040	-	1387783..1388229 (+)	447	WP_000776589.1	LytTR family DNA-binding domain-containing protein	-
R4706_RS07045	-	1388235..1388909 (+)	675	WP_000725750.1	LiaF transmembrane domain-containing protein	-
R4706_RS10820	-	1389154..1389351 (+)	198	Protein_1364	N-acetylmuramoyl-L-alanine amidase family protein	-
R4706_RS07060	-	1389376..1389507 (-)	132	WP_001811306.1	hypothetical protein	-
R4706_RS07065	-	1389601..1389900 (+)	300	WP_001818001.1	DUF4651 domain-containing protein	-
R4706_RS07070	-	1389897..1390214 (+)	318	WP_000615774.1	thioredoxin family protein	-

Sequence

Protein

Download Length: 273 a.a. Molecular weight: 30614.21 Da Isoelectric Point: 5.9310

                                >NTDB_id=895970 R4706_RS07020 WP_000601678.1 1384882..1385703(+) (rcrP) [Streptococcus pneumoniae strain 17023]

MILLAILFTCFSVYLELEVPTYISKITDLLGSQETNLDELWQPASMMMGMSFLAFLSVVAVGFFASRVAASYTSRLRSDI

FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGPIMAIWAIGKILGHSEYWLWAVLVVVIVNVLMTTV

LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV

AIYWIGAYVINDAAPIARLPLFSDMIIFMSYAM

Nucleotide

Download Length: 822 bp

                                >NTDB_id=895970 R4706_RS07020 WP_000601678.1 1384882..1385703(+) (rcrP) [Streptococcus pneumoniae strain 17023]

ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC

GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGTCCTTTCTTG

CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATT

TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA

CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTCCAATTATGGCTATCTGGGCTATTG

GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGTAGTGATTGTCAACGTCCTGATGACGACCGTT

TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGTTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT

AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA

CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTA

GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTAT

TTTCATGTCTTATGCCATGTAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(3-271)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A6I3U1Q8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
rcrP	Streptococcus mutans UA159	57.193	100	0.597

Detailed information NTG0895970