Detailed information NTG0894814

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: AAYR26_RS10765
• Genome accession: NZ_CP154901
• Coordinates: 2040111..2040716 (+)
• Length: 201 a.a.
• NCBI ID: WP_003183986.1
• Uniprot ID: Q65GP5
• Organism: Bacillus licheniformis strain FUA2146
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2035111..2045716

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR26_RS10725 (AAYR26_10735)	-	2035775..2036101 (+)	327	WP_003183994.1	hypothetical protein	-
AAYR26_RS10730 (AAYR26_10740)	-	2036193..2036372 (-)	180	WP_003183993.1	hypothetical protein	-
AAYR26_RS10735 (AAYR26_10745)	-	2036786..2037496 (+)	711	WP_003183992.1	poly-gamma-glutamate hydrolase family protein	-
AAYR26_RS10740 (AAYR26_10750)	-	2037557..2038021 (+)	465	WP_003183991.1	DinB family protein	-
AAYR26_RS10745 (AAYR26_10755)	-	2038117..2038296 (+)	180	WP_003183990.1	small acid-soluble spore protein H	-
AAYR26_RS10750 (AAYR26_10760)	-	2038381..2038503 (-)	123	WP_003183989.1	hypothetical protein	-
AAYR26_RS10755 (AAYR26_10765)	-	2038574..2039224 (-)	651	WP_003183988.1	protein kinase family protein	-
AAYR26_RS10760 (AAYR26_10770)	-	2039467..2039988 (+)	522	WP_003183987.1	intercompartmental signaling factor BofC	-
AAYR26_RS10765 (AAYR26_10775)	ruvA	2040111..2040716 (+)	606	WP_003183986.1	Holliday junction branch migration protein RuvA	Machinery gene
AAYR26_RS10770 (AAYR26_10780)	ruvB	2040726..2041730 (+)	1005	WP_003183985.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
AAYR26_RS10775 (AAYR26_10785)	-	2041723..2041923 (+)	201	WP_003183984.1	DUF2905 domain-containing protein	-
AAYR26_RS10780 (AAYR26_10790)	queA	2041964..2042992 (+)	1029	WP_003183982.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
AAYR26_RS10785 (AAYR26_10795)	tgt	2043021..2044166 (+)	1146	WP_003183980.1	tRNA guanosine(34) transglycosylase Tgt	-
AAYR26_RS10790 (AAYR26_10800)	yajC	2044213..2044476 (+)	264	WP_085959518.1	preprotein translocase subunit YajC	-
AAYR26_RS10795 (AAYR26_10805)	-	2044673..2045056 (-)	384	WP_003183976.1	TIGR04086 family membrane protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22508.86 Da
• Isoelectric Point: 5.7383

>NTDB_id=894814 AAYR26_RS10765 WP_003183986.1 2040111..2040716(+) (ruvA) [Bacillus licheniformis strain FUA2146]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKKNSKETIYTYHYVREDTNALYGFSTREEKMLFTKMLNVTGIGP
KGALAILASGDPGAVIEAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADAVPEIAADLFNHEEREQIHEAATALEEAL
EALRALGYSDREIKKVQPHLKKEEALSTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=894814 AAYR26_RS10765 WP_003183986.1 2040111..2040716(+) (ruvA) [Bacillus licheniformis strain FUA2146]
TTGATCGAATTCGTAAAAGGGACGATTGATTATGTATCGCCCCAATATATTGTCATTGAAAACGGCGGGATCGGCTATCA
GATCTTCACGCCAAATCCGTTTATTTATAAGAAAAACAGCAAAGAAACAATCTATACATACCATTATGTAAGAGAAGACA
CGAATGCGCTGTACGGCTTTTCGACAAGGGAAGAAAAAATGCTGTTTACGAAAATGCTGAATGTTACGGGGATCGGCCCA
AAAGGAGCGCTTGCGATCCTCGCTTCCGGCGATCCGGGAGCGGTGATTGAAGCGATCGAGAATGAGGACGAAGCATTTCT
CGTCAAATTTCCCGGCGTAGGCAAAAAAACGGCAAGGCAGATCATCCTTGACCTGAAAGGGAAGCTTGCGGATGCCGTTC
CTGAAATCGCTGCCGATCTGTTTAACCATGAAGAGCGGGAGCAAATTCATGAAGCGGCAACGGCTCTTGAGGAAGCGCTT
GAAGCATTGAGGGCGCTCGGCTATTCCGATCGGGAAATTAAAAAAGTCCAGCCTCATTTGAAAAAGGAAGAGGCGCTTTC
GACAGATCAATACGTTAAAAAAGCATTGCAAAAATTGTTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: Q65GP5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	83.582	100	0.836
ruvA	Streptococcus pneumoniae R6	40.291	100	0.413
ruvA	Streptococcus pneumoniae D39	40.291	100	0.413
ruvA	Streptococcus pneumoniae TIGR4	40.291	100	0.413