Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   R3H61_RS07820 Genome accession   NZ_CP136951
Coordinates   1571152..1571703 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Spyo09     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1566152..1576703
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R3H61_RS07785 (R3H61_07790) - 1566156..1566899 (-) 744 WP_161761883.1 class I SAM-dependent DNA methyltransferase -
  R3H61_RS07790 (R3H61_07795) rsfS 1566947..1567300 (-) 354 WP_011017339.1 ribosome silencing factor -
  R3H61_RS07795 (R3H61_07800) yqeK 1567324..1567917 (-) 594 WP_129284405.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  R3H61_RS07800 (R3H61_07805) - 1567914..1568546 (-) 633 WP_014407306.1 nicotinate-nucleotide adenylyltransferase -
  R3H61_RS07805 (R3H61_07810) yhbY 1568615..1568923 (-) 309 WP_111685182.1 ribosome assembly RNA-binding protein YhbY -
  R3H61_RS07810 (R3H61_07815) yqeH 1568948..1570066 (-) 1119 WP_015016688.1 ribosome biogenesis GTPase YqeH -
  R3H61_RS07815 (R3H61_07820) - 1570066..1570593 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  R3H61_RS07820 (R3H61_07825) comX/sigX/comX2/sigX2 1571152..1571703 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=893734 R3H61_RS07820 WP_010921894.1 1571152..1571703(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain Spyo09]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=893734 R3H61_RS07820 WP_010921894.1 1571152..1571703(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain Spyo09]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.