Detailed information NTG0880476

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: RHP70_RS05660
• Genome accession: NZ_CP134496
• Coordinates: 1166005..1166967 (+)
• Length: 320 a.a.
• NCBI ID: WP_024425055.1
• Uniprot ID: -
• Organism: Bacillus sp. SG20001
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1161005..1171967

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RHP70_RS05630 (RHP70_05630)	argF	1161344..1162294 (+)	951	WP_149125766.1	ornithine carbamoyltransferase	-
RHP70_RS05635 (RHP70_05635)	-	1162397..1162576 (+)	180	WP_008348517.1	YjzC family protein	-
RHP70_RS05640 (RHP70_05640)	-	1162740..1164005 (+)	1266	WP_034282089.1	MFS transporter	-
RHP70_RS05645 (RHP70_05645)	-	1164117..1164311 (-)	195	WP_003211779.1	YjzD family protein	-
RHP70_RS05650 (RHP70_05650)	-	1164524..1165264 (+)	741	WP_024425057.1	hypothetical protein	-
RHP70_RS05655 (RHP70_05655)	-	1165338..1165913 (+)	576	WP_024425056.1	hypothetical protein	-
RHP70_RS05660 (RHP70_05660)	med	1166005..1166967 (+)	963	WP_024425055.1	BMP family ABC transporter substrate-binding protein	Regulator
RHP70_RS05665 (RHP70_05665)	comZ	1166980..1167177 (+)	198	WP_024425054.1	ComZ family protein	Regulator
RHP70_RS05670 (RHP70_05670)	-	1167188..1167421 (-)	234	WP_024425053.1	hypothetical protein	-
RHP70_RS05675 (RHP70_05675)	-	1167593..1168531 (+)	939	WP_024425052.1	beta-ketoacyl-ACP synthase III	-
RHP70_RS05680 (RHP70_05680)	fabF	1168553..1169794 (+)	1242	WP_024425051.1	beta-ketoacyl-ACP synthase II	-
RHP70_RS05685 (RHP70_05685)	-	1169872..1170675 (+)	804	WP_149125765.1	DUF2268 domain-containing protein	-
RHP70_RS05690 (RHP70_05690)	-	1170825..1171805 (+)	981	WP_025093401.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35639.48 Da
• Isoelectric Point: 5.0003

>NTDB_id=880476 RHP70_RS05660 WP_024425055.1 1166005..1166967(+) (med) [Bacillus sp. SG20001]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVVEMGKFSSTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=880476 RHP70_RS05660 WP_024425055.1 1166005..1166967(+) (med) [Bacillus sp. SG20001]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGTGAAATTTTTAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGGCAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGAGCAAAATATCAAGATGAACATGTACAAGTATTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTTGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGGTACGTCACCGATCAATCC
AACCTCGGCAGCCATACAGTTTTAACGAGCACTGTACAGCATGTTGATAAAGCGTACAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGATGAGTACTCCTTTGATTTTAAAGAAGGAGTGGTCGAGATGGGGAAATTTAGTTCCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCATACAAAAAAACAGGTAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.537	97.813	0.631