Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   RH061_RS03615 Genome accession   NZ_CP134494
Coordinates   721606..722556 (+) Length   316 a.a.
NCBI ID   WP_311074004.1    Uniprot ID   -
Organism   Mesobacillus jeotgali strain PS1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 716606..727556
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RH061_RS03580 (RH061_03580) - 716629..717012 (+) 384 WP_311073991.1 GntR family transcriptional regulator -
  RH061_RS03585 (RH061_03585) - 717009..717914 (+) 906 WP_311073993.1 ABC transporter ATP-binding protein -
  RH061_RS03590 (RH061_03590) - 717892..718641 (+) 750 WP_311073995.1 hypothetical protein -
  RH061_RS03595 (RH061_03595) - 718638..719324 (+) 687 WP_311073997.1 hypothetical protein -
  RH061_RS03600 (RH061_03600) - 719415..720473 (+) 1059 WP_311073999.1 aromatic acid exporter family protein -
  RH061_RS03605 (RH061_03605) - 720491..720868 (+) 378 WP_311074001.1 hypothetical protein -
  RH061_RS03610 (RH061_03610) - 721126..721359 (+) 234 WP_311074003.1 hypothetical protein -
  RH061_RS03615 (RH061_03615) ceuB 721606..722556 (+) 951 WP_311074004.1 ABC transporter permease Machinery gene
  RH061_RS03620 (RH061_03620) - 722549..723499 (+) 951 WP_311074005.1 iron chelate uptake ABC transporter family permease subunit -
  RH061_RS03625 (RH061_03625) - 723496..724257 (+) 762 WP_311074006.1 ABC transporter ATP-binding protein -
  RH061_RS03630 (RH061_03630) - 724276..725211 (+) 936 WP_311074007.1 siderophore ABC transporter substrate-binding protein -
  RH061_RS03635 (RH061_03635) - 725211..725513 (+) 303 WP_311074009.1 antibiotic biosynthesis monooxygenase -
  RH061_RS03640 (RH061_03640) - 725950..727548 (+) 1599 WP_311074010.1 TrkA C-terminal domain-containing protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34951.23 Da        Isoelectric Point: 10.1767

>NTDB_id=880414 RH061_RS03615 WP_311074004.1 721606..722556(+) (ceuB) [Mesobacillus jeotgali strain PS1]
MKKRYLFTSLIILSLLSLFVGVSRITPMELLDFQSEETEIFLISRVPRLIAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLFFANASTIEKMLIAFVFALAGTFLFMQILDRIKFKDAIFIPLVGMMLGNILSSISTFFAYKADVI
QNMSAWLQGDFSMIMKGRYELLYISIPILVIAYLFANRFTVAGMGEDFSKNLGLAYKRVVNIGLILVALITATVVLTVGM
IPFLGLIIPNIISIFKGDHLQKTLPHTALLGANFLLVTDILGRVLIYPYEISISLMVGVIGSGIFLYLLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=880414 RH061_RS03615 WP_311074004.1 721606..722556(+) (ceuB) [Mesobacillus jeotgali strain PS1]
ATGAAAAAGCGTTACTTGTTTACATCCTTGATCATCCTTTCATTGCTTTCCCTGTTTGTGGGAGTAAGCCGCATAACGCC
GATGGAGCTGCTTGATTTTCAATCGGAGGAAACAGAAATCTTCCTGATCAGCAGGGTGCCGCGGCTGATTGCAATCCTGC
TTGCTGGCGCAGGGATGAGCATTGCCGGTCTGATCATGCAGCAGCTCAGCCGGAATAAGTTTGTATCACCGACAACGGCC
GGCACGCTCGATGCAACGAGATTGGGCATTCTCGTTTCGATGCTGTTTTTTGCAAACGCGTCCACGATTGAGAAAATGCT
GATTGCGTTTGTATTCGCGCTGGCGGGAACGTTCTTGTTCATGCAAATCCTTGACCGGATCAAGTTCAAGGACGCGATTT
TCATTCCGCTTGTTGGGATGATGCTGGGTAATATCCTATCATCCATATCGACATTCTTTGCTTACAAAGCCGATGTCATC
CAGAACATGTCCGCGTGGCTGCAGGGTGATTTTTCGATGATCATGAAGGGGCGCTATGAGTTGCTGTACATAAGCATTCC
AATCCTGGTGATTGCCTATTTATTCGCCAATCGCTTCACGGTAGCGGGAATGGGAGAAGACTTTTCAAAAAACCTGGGGC
TCGCCTACAAACGGGTCGTCAACATCGGGTTGATCCTTGTTGCATTGATTACAGCGACAGTCGTACTGACAGTTGGAATG
ATTCCGTTCCTCGGGCTGATCATCCCGAACATCATTTCGATTTTCAAGGGCGACCACCTGCAAAAAACACTGCCGCACAC
AGCTCTGCTTGGCGCTAATTTCCTTCTTGTCACGGACATACTCGGGCGCGTCCTGATTTATCCGTACGAAATTTCGATTT
CCCTGATGGTCGGCGTCATCGGCAGCGGAATTTTCTTGTACCTGTTGTTTAGGAGGAAGGCTTATGCGTAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.396

99.051

0.519