Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   Q9312_RS11715 Genome accession   NZ_CP133548
Coordinates   2609782..2610180 (-) Length   132 a.a.
NCBI ID   WP_309201037.1    Uniprot ID   A0AA51X6A4
Organism   Pleionea litopenaei strain HL-JVS1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2604782..2615180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q9312_RS11695 (Q9312_11695) - 2605742..2606620 (-) 879 WP_309201034.1 protein-glutamate O-methyltransferase CheR -
  Q9312_RS11700 (Q9312_11700) - 2606644..2608713 (-) 2070 WP_309201035.1 methyl-accepting chemotaxis protein -
  Q9312_RS11705 (Q9312_11705) - 2608778..2609320 (-) 543 WP_309201036.1 chemotaxis protein CheW -
  Q9312_RS11710 (Q9312_11710) pilH 2609367..2609732 (-) 366 WP_144392326.1 twitching motility response regulator PilH -
  Q9312_RS11715 (Q9312_11715) pilG 2609782..2610180 (-) 399 WP_309201037.1 twitching motility response regulator PilG Regulator
  Q9312_RS11720 (Q9312_11720) gshB 2610497..2611450 (+) 954 WP_309201038.1 glutathione synthase -
  Q9312_RS11725 (Q9312_11725) - 2611562..2612455 (+) 894 WP_309201039.1 TonB family protein -
  Q9312_RS11730 (Q9312_11730) - 2612509..2613069 (+) 561 WP_309201040.1 YqgE/AlgH family protein -
  Q9312_RS11735 (Q9312_11735) ruvX 2613062..2613493 (+) 432 WP_309201041.1 Holliday junction resolvase RuvX -
  Q9312_RS11740 (Q9312_11740) pilU 2613563..2614705 (-) 1143 WP_309201042.1 PilT/PilU family type 4a pilus ATPase Machinery gene

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14495.75 Da        Isoelectric Point: 8.4980

>NTDB_id=874807 Q9312_RS11715 WP_309201037.1 2609782..2610180(-) (pilG) [Pleionea litopenaei strain HL-JVS1]
MDNSFEGLKAMVIDDSKTIRRTAETLLKKVGCEVVTATDGFDALAKIADHKPDIIFVDIMMPRLDGYQTCALIKNNKAFQ
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSRDELLNAIRSHVSGAKQSA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=874807 Q9312_RS11715 WP_309201037.1 2609782..2610180(-) (pilG) [Pleionea litopenaei strain HL-JVS1]
ATGGATAATTCCTTCGAAGGCTTAAAAGCAATGGTGATCGACGACAGTAAAACGATCCGTCGCACCGCAGAAACATTACT
TAAAAAAGTAGGTTGCGAAGTGGTCACCGCAACAGATGGTTTTGATGCTTTAGCAAAAATTGCGGACCATAAGCCTGATA
TTATCTTTGTCGATATTATGATGCCGCGTCTCGACGGCTACCAAACCTGTGCTTTAATTAAGAACAACAAAGCTTTTCAA
TCAACGCCTGTGATTATGTTATCGAGTAAAGACGGGCTATTTGATAAGGCGAAAGGTAGAATAGTCGGGTCAGACCAATA
TTTGACAAAACCGTTTAGTCGAGATGAGTTGCTCAATGCAATTCGCTCACATGTTAGTGGTGCTAAGCAATCTGCTTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(11-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.778

95.455

0.742
  vicR Streptococcus mutans UA159

41.026

88.636

0.364