Detailed information NTG0874789

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RDI66_RS09870
• Genome accession: NZ_CP133492
• Coordinates: 2089930..2091051 (+)
• Length: 373 a.a.
• NCBI ID: WP_014668489.1
• Uniprot ID: A0A849CTM5
• Organism: Pasteurella multocida strain PM140
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2084930..2096051

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDI66_RS09850 (RDI66_09850)	napG	2087110..2087862 (+)	753	WP_005718376.1	ferredoxin-type protein NapG	-
RDI66_RS09855 (RDI66_09855)	napH	2087862..2088737 (+)	876	WP_005752145.1	quinol dehydrogenase ferredoxin subunit NapH	-
RDI66_RS09860 (RDI66_09860)	-	2088743..2089168 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RDI66_RS09865 (RDI66_09865)	-	2089184..2089777 (+)	594	WP_309042810.1	cytochrome c3 family protein	-
RDI66_RS09870 (RDI66_09870)	dprA	2089930..2091051 (+)	1122	WP_014668489.1	DNA-processing protein DprA	Machinery gene
RDI66_RS09875 (RDI66_09875)	lptD	2091157..2093505 (-)	2349	WP_005757798.1	LPS assembly protein LptD	-
RDI66_RS09880 (RDI66_09880)	-	2093569..2094120 (-)	552	WP_014668491.1	DNA-3-methyladenine glycosylase I	-
RDI66_RS09885 (RDI66_09885)	tal	2094278..2095231 (+)	954	WP_010907246.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41595.75 Da
• Isoelectric Point: 6.2635

>NTDB_id=874789 RDI66_RS09870 WP_014668489.1 2089930..2091051(+) (dprA) [Pasteurella multocida strain PM140]
MSSYLPLLLRLLQIPRLGSLAIQRLLEHVSPAELMEYDTKAFQQIGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALPRTENAFSQQVTDTSTINTARITP
EHPELYAKIGYMPVSIDVLAQQVNLPVDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=874789 RDI66_RS09870 WP_014668489.1 2089930..2091051(+) (dprA) [Pasteurella multocida strain PM140]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGCTGGCGATCCAGCGTTTATTGGA
GCACGTCAGTCCAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATAGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCACGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTGGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAACCTCCTGTGGCAGAAAACTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTGTCTTTGGGGACATTAGTCATTGAAGCTTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATAAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGCCTCGTACGGAGAACGCCTTTTCTCAACAAGTAACAGACACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATTTACCTGT
TGATACCTTATTAGTACAGCTTTTAACTTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (319-367)

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

3D structure

• AlphaFold DB: A0A849CTM5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	60.811	99.196	0.603
dprA	Glaesserella parasuis strain SC1401	53.143	93.834	0.499
dprA	Vibrio cholerae strain A1552	45.722	100	0.458
dprA	Vibrio campbellii strain DS40M4	45.405	99.196	0.45
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394