Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   RDV54_RS05120 Genome accession   NZ_CP133471
Coordinates   1081848..1083761 (-) Length   637 a.a.
NCBI ID   WP_000614511.1    Uniprot ID   -
Organism   Streptococcus mitis strain LMG 14557     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 1076848..1088761
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV54_RS05095 (RDV54_05095) - 1076884..1077849 (+) 966 WP_000225997.1 LacI family DNA-binding transcriptional regulator -
  RDV54_RS05100 (RDV54_05100) - 1077990..1079264 (-) 1275 WP_000704370.1 hydroxymethylglutaryl-CoA reductase, degradative -
  RDV54_RS05105 (RDV54_05105) - 1079264..1080436 (-) 1173 WP_000151944.1 hydroxymethylglutaryl-CoA synthase -
  RDV54_RS05110 (RDV54_05110) - 1080550..1080999 (-) 450 WP_004239205.1 threonine/serine exporter family protein -
  RDV54_RS05115 (RDV54_05115) - 1081001..1081759 (-) 759 WP_000392943.1 threonine/serine exporter family protein -
  RDV54_RS05120 (RDV54_05120) stkP 1081848..1083761 (-) 1914 WP_000614511.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  RDV54_RS05125 (RDV54_05125) - 1083758..1084498 (-) 741 WP_000406256.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  RDV54_RS05130 (RDV54_05130) rsmB 1084513..1085826 (-) 1314 WP_004239203.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  RDV54_RS05135 (RDV54_05135) fmt 1085819..1086754 (-) 936 WP_000163673.1 methionyl-tRNA formyltransferase -

Sequence

Protein


Download         Length: 637 a.a.        Molecular weight: 69868.46 Da        Isoelectric Point: 9.3808

>NTDB_id=874484 RDV54_RS05120 WP_000614511.1 1081848..1083761(-) (stkP) [Streptococcus mitis strain LMG 14557]
MIQIGKIFAGRYRILKQIGRGGMADVYLAKDLILDGEEVAVKVLRTNYQTDPIAVARFQREARAMADLDHPHIVRITDIG
EEEGQQYLAMEYVAGLDLKRYIKEHHPLSNEEAVRIMGQILLAMRLAHTRGIVHRDLKPQNILLTPDGTAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATVQSDIYAMGIIFYEMLTGHIPYDGDSAVTIALQHFQKPLPSVIAENPSVP
QALENVVIKATAKKLTDRYKSVAEMYVDLSSSLSYNRRNEPKLVFDDATKADTKTLPKVPQSTLTSIPKAPVQEGRPQPK
PQPHQTEKTVPSSKPTKRRRMKARYPILFATFLLVVASLVWILYRTPATIAIPNVAGQTVAEAKEALKKANFEVGEEKSE
SSDKVEEGRVIRTDPEAGKTRKEGTKINLIVSSGQQSFQLGNYLGRKSSDVVAELKGKKVPENLIKIEEEESNEIEAGTI
MKQSLPEGTTYDLSKATQIVLTVAKKVNSISMPSYIGSSREFAVNNLTEIYDIKKANIEVVEVSKAPEGTAEGTVIEQSP
KAGEKVDLSTTRVKISIYKPKTPPSSSSSTSVQRGNQGSPTTPNQGNQQGGQQGNQQGTVPTPSQPNSEGNHENSRD

Nucleotide


Download         Length: 1914 bp        

>NTDB_id=874484 RDV54_RS05120 WP_000614511.1 1081848..1083761(-) (stkP) [Streptococcus mitis strain LMG 14557]
ATGATCCAAATCGGCAAGATTTTTGCCGGGCGGTATCGGATTCTCAAACAGATTGGTCGAGGAGGCATGGCAGATGTTTA
CTTGGCTAAAGATTTGATTCTAGACGGGGAAGAAGTGGCAGTAAAGGTCCTGAGAACCAACTACCAGACAGACCCGATTG
CTGTGGCGCGTTTCCAGCGGGAAGCGAGAGCCATGGCGGATCTGGACCATCCTCATATCGTTCGGATTACAGATATCGGT
GAAGAAGAGGGACAACAGTATCTTGCAATGGAATATGTTGCTGGATTAGACCTCAAACGCTATATCAAGGAACATCACCC
TCTTTCAAATGAAGAAGCGGTTCGAATCATGGGACAAATCCTCTTGGCTATGCGCTTAGCCCATACTCGAGGAATTGTTC
ACAGGGATTTGAAACCGCAAAATATCCTTTTGACCCCAGATGGGACTGCCAAGGTTACAGACTTTGGGATTGCAGTAGCC
TTTGCAGAGACGAGTTTGACTCAGACCAACTCAATGCTGGGTTCCGTTCATTATTTATCGCCAGAGCAGGCGCGTGGTTC
TAAAGCAACTGTGCAGAGTGATATCTATGCCATGGGGATTATTTTCTATGAGATGCTGACAGGTCATATTCCTTACGATG
GGGATAGTGCGGTAACCATCGCCCTCCAGCATTTCCAGAAACCTCTGCCGTCGGTTATAGCTGAAAATCCATCTGTGCCT
CAGGCATTAGAAAATGTTGTTATCAAGGCAACTGCTAAGAAATTAACAGATCGTTACAAATCAGTCGCTGAAATGTATGT
GGATTTGTCGAGTAGTTTGTCTTATAATCGTCGTAATGAACCAAAGCTAGTCTTTGACGATGCAACTAAGGCAGATACTA
AAACTCTTCCTAAAGTACCGCAAAGTACCTTGACTTCTATTCCTAAAGCTCCGGTACAAGAGGGAAGACCTCAACCTAAG
CCCCAACCTCATCAGACAGAAAAAACAGTACCTAGTTCAAAGCCAACCAAACGTCGTCGTATGAAAGCACGTTATCCAAT
TTTATTTGCGACCTTCTTGTTGGTTGTGGCATCCTTGGTATGGATTTTATATAGAACGCCCGCTACCATTGCTATTCCAA
ATGTGGCAGGTCAGACGGTTGCAGAGGCTAAAGAGGCTCTAAAAAAAGCCAATTTTGAGGTTGGTGAAGAAAAATCAGAG
TCCAGTGATAAGGTTGAAGAAGGTCGGGTTATTCGTACAGACCCTGAAGCTGGTAAAACACGTAAAGAAGGAACAAAAAT
TAATTTGATTGTGTCTTCTGGTCAGCAGTCTTTCCAACTCGGAAATTATCTCGGAAGAAAGTCCAGTGATGTAGTGGCAG
AATTGAAGGGTAAGAAGGTTCCAGAAAATCTGATTAAGATTGAGGAAGAAGAATCCAACGAAATCGAAGCCGGTACAATC
ATGAAACAAAGTTTACCGGAGGGAACAACCTATGATCTTAGCAAGGCAACTCAAATAGTTTTGACAGTTGCTAAAAAAGT
AAATTCTATTTCAATGCCAAGCTATATTGGTTCTAGCCGAGAATTTGCAGTCAATAATCTTACAGAGATATATGACATTA
AAAAAGCTAATATCGAAGTTGTAGAAGTGTCTAAAGCTCCTGAAGGAACTGCTGAGGGGACTGTTATAGAGCAAAGTCCA
AAAGCAGGCGAAAAAGTAGACTTGAGCACTACTCGTGTTAAAATTTCTATTTATAAACCCAAAACACCACCATCAAGTTC
CTCTTCAACGTCAGTTCAACGTGGTAACCAAGGTTCACCTACTACTCCAAATCAAGGGAATCAACAAGGTGGCCAGCAAG
GAAATCAACAAGGAACGGTTCCTACTCCGAGTCAACCAAATAGTGAAGGAAATCACGAAAATTCTCGTGATTAA

Domains

Predicted by InterproScan.

PASTA domain (PASTA)

(511-579)

Protein kinase domain (Pkinase)

(12-227)

PASTA domain (PASTA)

(371-432)

PASTA domain (PASTA)

(442-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

78.462

91.837

0.721
  stkP Streptococcus pneumoniae D39

78.12

91.837

0.717
  stkP Streptococcus pneumoniae R6

78.12

91.837

0.717
  stkP Streptococcus pneumoniae Rx1

77.949

91.837

0.716
  stkP/pknB Streptococcus salivarius strain HSISS4

54.778

91.994

0.504
  pknB Streptococcus mutans UA159

55.44

90.895

0.504